[Alpha Horseshoes (1.25)]



Key sequence ASTRAL dataset search by ComSubstruct
Pairwise Comparison by DALI
Frequency table of the ratio of seq. lengths

Execution time
[Best result]  |LCS|/|Key Seq.| value Superimpos. Z-score
                   Length of the LCS Num. of aligned residues
[2nd best]   |LCS|/|Key Seq.| value RMSD of CAs
                   Length of the LCS Seq. identity

Leucine-rich Repeat Variant (1.25.10.10)
jpg image

1gw5B00
(length 575)
|LCS|/|Key Seq.|:
  [0.9, 1.0]      0
  [0.8, 0.9)      1
  [0.7, 0.8)    40


Exe. Time:
79.8 (sec.)
d1gw5b_

|L|/|K|:  0.84
LCS len.:  480
jpg image jpg image Z:  49.5
AR:  575
RMSD   0.7A
SI:  90%
d1u6gc_
(Res291-983)


|L|/|K|:  0.76
LCS len.  438
jpg image jpg image Z:  12.8
AR:  361
RMSD:  9.3A
SI:  16%
jpg image

1ibrB00
(length 454)
|LCS|/|Key Seq.|:
  [0.9, 1.0]        1
  [0.8, 0.9)        4
  [0.7, 0.8)   130


Exe. Time:
54.4 (sec.)
d1brb_

|L|/|K|:  1.00
LCS len.:  454
jpg image (identical)
Z:  -
AR:  454
RMSD   0.0A
SI:  100%
d1qgra_
(Res3-501)


|L|/|K|:  0.89
LCS len.  406
jpg image jpg image Z:  43.8
AR:  448
RMSD:  2.2A
SI:  95%
jpg image

1jdhA00
(length 504)
|LCS|/|Key Seq.|:
  [0.9, 1.0]      1
  [0.8, 0.9)      8
  [0.7, 0.8)    87


Exe. Time:
64.5 (sec.)
d1jdha_

|L|/|K|:  1.00
LCS len.:  504
jpg image (identical)
Z:  -
AR:  504
RMSD   0.0A
SI:  100%
d1b3ua_
(Res3-556)


|L|/|K|:  0.83
LCS len.  420
jpg image jpg image Z:  8.9
AR:  82
RMSD:  3.2A
SI:  15%
jpg image

1lrv000
(length 229)
|LCS|/|Key Seq.|:
  [0.9, 1.0]       1
  [0.8, 0.9)       0
  [0.7, 0.8)   220


Exe. Time:
20.5 (sec.)
d1lrv__

|L|/|K|:  1.00
LCS len.:  229
jpg image (identical)
Z:  -
AR:  229
RMSD   0.0A
SI:  100%
d1dm5a_
(Res3-254)


|L|/|K|:  0.76
LCS len.  173
jpg image jpg image Z:  2.1
AR:  52
RMSD:  3.4A
SI:  15%
jpg image

1m8zA00
(length 335)
|LCS|/|Key Seq.|:
  [0.9, 1.0]       1
  [0.8, 0.9)       0
  [0.7, 0.8)   394


Exe. Time:
33.5 (sec.)
d1m8za_

|L|/|K|:  1.00
LCS len.:  335
jpg image (identical)
Z:  -
AR:  335
RMSD   0.0A
SI:  100%
d1ee4a_
(Res89-456)


|L|/|K|:  0.79
LCS len.  264
jpg image jpg image Z:  12.2
AR:  282
RMSD:  8.6A
SI:  9%

Lipovitellin. Chain A, domain 2 (1.25.10.20)
jpg image

1lshA02
(length 331)
|LCS|/|Key Seq.|:
  [0.9, 1.0]       1
  [0.8, 0.9)       0
  [0.7, 0.8)   444


Exe. Time:
32.9 (sec.)
d1lsha1

|L|/|K|:  1.00
LCS len.:  331
jpg image (identical)
Z:  -
AR:  331
RMSD   0.0A
SI:  100%
d1b3ua_
(Res135-498)


|L|/|K|:  0.80
LCS len.  263
jpg image jpg image Z:  8.4
AR:  220
RMSD:  4.9A
SI:  7%

IP3 receptor type 1 binding core, domain 2 (1.25.10.30)
jpg image

1n4kA02
(length 144)
|LCS|/|Key Seq.|:
  [0.9, 1.0]        1
  [0.8, 0.9)    527
  [0.7, 0.8)  5217


Exe. Time:
14.3 (sec.)
d1n4ka1

|L|/|K|:  0.99
LCS len.:  143
jpg image (identical)
Z:  -
AR:  143
RMSD   0.0A
SI:  100%
d1f5na1
(Res314-471)


|L|/|K|:  0.88
LCS len.  126
jpg image jpg image Z:  3.1
AR:  64
RMSD:  5.0A
SI:  11%