Roll (3.10) -2

[Roll (3.10) -2]

|LCS| denotes the length of the longest common subsequence.
|Key Seq.| denotes the length of the key sequence.
(Upon length counting, residues without 5-tile code are omitted, such as two residues at both ends.)
In the images of superimposition, the C-terminal of the key sequence is connected with the N-terminal of a target sequecne
(because of the DaliLite output format).
Click the images to view larger image.
Click the filenames to view the corresponding PDB file
Click "LCS" to view the longest common subsequence

Key sequence	ASTRAL dataset search by ComSubstruct		Pairwise Comparison by DALI
	Frequency table of the ratio of seq. lengths Execution time	[Best result] \|LCS\|/\|Key Seq.\| value	Superimpos.	Z-score
		Length of the LCS		Num. of aligned residues
		[2nd best] \|LCS\|/\|Key Seq.\| value		RMSD of CAs
		Length of the LCS		Seq. identity

[PDB] Immunoglobulin Binding Protein (3.10.20.10)

1d4bA00 (length 118)	\|LCS\|/\|Key Seq.\|: [0.9, 1.0] 1 [0.8, 0.9) 17 [0.7, 0.8) 13556 Exe. Time: 13.6 (sec.)	d1d4ba_ \|L\|/\|K\|: 1.00 LCS len.: 118	(identical)	Z: - AR: 118 RMSD 0.0A SI: 100%
1d4bA00 (length 118)		d1v3ea_ (Res298-426) \|L\|/\|K\|: 0.83 LCS len. 98	No significant similarities	Z: - AR: - RMSD: -A SI: -%

1hz6B00 (length 59)	\|LCS\|/\|Key Seq.\|: [0.9, 1.0] 6 [0.8, 0.9) 1677 [0.7, 0.8) 27390 Exe. Time: 11.0 (sec.)	d1hz6a_ \|L\|/\|K\|: 0.97 LCS len.: 57		Z: 13.2 AR: 63 RMSD 0.6A SI: 100%
1hz6B00 (length 59)		d1k52a_ (Res-1-62) \|L\|/\|K\|: 0.97 LCS len. 57		Z: 12.7 AR: 61 RMSD: 0.5A SI: 98%

1ibxA00 (length 77)	\|LCS\|/\|Key Seq.\|: [0.9, 1.0] 1 [0.8, 0.9) 2 [0.7, 0.8) 10139 Exe. Time: 12.0 (sec.)	d1ibxa_ \|L\|/\|K\|: 1.00 LCS len.: 77	(identical)	Z: - AR: 77 RMSD 0.0A SI: 100%
1ibxA00 (length 77)		d1fil__ (Res17-100) \|L\|/\|K\|: 0.81 LCS len. 62	No significant similarities	Z: - AR: - RMSD: -A SI: -%

1ibxB00 (length 85)	\|LCS\|/\|Key Seq.\|: [0.9, 1.0] 1 [0.8, 0.9) 5 [0.7, 0.8) 6624 Exe. Time: 12.0 (sec.)	d1ibxb_ \|L\|/\|K\|: 1.00 LCS len.: 85	(identical)	Z: - AR: 85 RMSD 0.0A SI: 100%
1ibxB00 (length 85)		d1m0da_ (Res43-135) \|L\|/\|K\|: 0.80 LCS len. 68	No significant similarities	Z: - AR: - RMSD: -A SI: -%

1igd000 (length 57)	\|LCS\|/\|Key Seq.\|: [0.9, 1.0] 19 [0.8, 0.9) 4065 [0.7, 0.8) 51805 Exe. Time: 10.3 (sec.)	d2igd__ \|L\|/\|K\|: 1.00 LCS len.: 57	(identical)	Z: - AR: 57 RMSD 0.0A SI: 100%
1igd000 (length 57)		d1pgx__ (Res10-71) \|L\|/\|K\|: 1.00 LCS len. 57		Z: 13.2 AR: 60 RMSD: 0.4A SI: 100%

1mhhF00 (length 58)	\|LCS\|/\|Key Seq.\|: [0.9, 1.0] 5 [0.8, 0.9) 1441 [0.7, 0.8) 27607 Exe. Time: 10.6 (sec.)	d1k52a_ (Res0-62) \|L\|/\|K\|: 0.97 LCS len.: 56		Z: 12.6 AR: 60 RMSD 0.5A SI: 72%
1mhhF00 (length 58)		d1mhhe_ \|L\|/\|K\|: 0.95 LCS len. 55		Z: 13.6 AR: 61 RMSD: 0.5A SI: 100%

1pgx000 (length 66)	\|LCS\|/\|Key Seq.\|: [0.9, 1.0] 4 [0.8, 0.9) 2574 [0.7, 0.8) 38096 Exe. Time: 10.9 (sec.)	d1pgx_ \|L\|/\|K\|: 1.00 LCS len.: 66	(identical)	Z: - AR: 66 RMSD 0.0A SI: 100%
1pgx000 (length 66)		d1u55a_ (Res105-176) \|L\|/\|K\|: 0.91 LCS len. 60		Z: 1.9 AR: 46 RMSD: 3.4A SI: 0%

1xf5M00 (length 63)	\|LCS\|/\|Key Seq.\|: [0.9, 1.0] 8 [0.8, 0.9) 1668 [0.7, 0.8) 23347 Exe. Time: 10.2 (sec.)	d1k52a_ \|L\|/\|K\|: 0.92 LCS len.: 58		Z: 11.5 AR: 65 RMSD 2.6A SI: 72%
1xf5M00 (length 63)		d1hz6a_ \|L\|/\|K\|: 0.91 LCS len. 57		Z: 11.5 AR: 64 RMSD: 2.0A SI: 72%