[2-Layer Sandwich (3.30) -2]



Key sequence ASTRAL dataset search by ComSubstruct
Pairwise Comparison by DALI
Frequency table of the ratio of seq. lengths

Execution time
[Best result]  |LCS|/|Key Seq.| value Superimpos. Z-score
                   Length of the LCS Num. of aligned residues
[2nd best]   |LCS|/|Key Seq.| value RMSD of CAs
                   Length of the LCS Seq. identity

[PDB] Neurotoxin (3.30.30.10)
jpg image

1aho002
(length 60)
|LCS|/|Key Seq.|:
  [0.9, 1.0]           4
  [0.8, 0.9)    2802
  [0.7, 0.8)  40321


Exe. Time:
10.7 (sec.)
d1aho__

|L|/|K|:  1.00
LCS len.:  60
jpg image (identical)
Z:  -
AR:  60
RMSD   0.0A
SI:  100%
d1dq7a_

|L|/|K|:  0.95
LCS len.  57
jpg image jpg image Z:  13.9
AR:  63
RMSD:  0.7A
SI:  51%
jpg image

1bcg000
(length 70)
|LCS|/|Key Seq.|:
  [0.9, 1.0]        1
  [0.8, 0.9)      54
  [0.7, 0.8)  8822


Exe. Time:
11.4 (sec.)
d1bcg__

|L|/|K|:  1.00
LCS len.:  70
jpg image (identical)
Z:  -
AR:  70
RMSD   0.0A
SI:  100%
d1t0za_

|L|/|K|:  0.84
LCS len.  59
jpg image jpg image Z:  13.7
AR:  68
RMSD:  1.2A
SI:  65%
jpg image

1brz000
(length 49)
|LCS|/|Key Seq.|:
  [0.9, 1.0]         1
  [0.8, 0.9)       34
  [0.7, 0.8) 23287


Exe. Time:
14.9 (sec.)
d1brz__

|L|/|K|:  1.00
LCS len.:  49
jpg image (identical)
Z:  -
AR:  49
RMSD   0.0A
SI:  100%
d1oaca1
(Res640-692)


|L|/|K|:  0.84
LCS len.  41
jpg image No
significant similarities
Z:  -
AR:  -
RMSD:  -A
SI:  -%
jpg image

1npiA00
(length 57)
|LCS|/|Key Seq.|:
  [0.9, 1.0]          1
  [0.8, 0.9)     237
  [0.7, 0.8) 38582


Exe. Time:
11.8 (sec.)
d1npia_

|L|/|K|:  1.00
LCS len.:  57
jpg image (identical)
Z:  -
AR:  57
RMSD   0.0A
SI:  100%
d2b3ca

|L|/|K|:  0.86
LCS len.  49
jpg image jpg image
Z:  8.5
AR:  60
RMSD:  2.5A
SI:  40%
jpg image

2sn3000
(length 61)
|LCS|/|Key Seq.|:
  [0.9, 1.0]         1
  [0.8, 0.9)     149
  [0.7, 0.8) 27123


Exe. Time:
10.9 (sec.)
d2sn3__

|L|/|K|:  1.00
LCS len.:  61
jpg image (identical)
Z:  -
AR:  61
RMSD   0.0A
SI:  100%
d1jzaa_

|L|/|K|:  0.89
LCS len.  54
jpg image jpg image Z:  15.2
AR:  65
RMSD:  0.5A
SI:  95%

[PDB] Hydrolase (3.30.30.30)
jpg image

1ba1002
(length 51)
|LCS|/|Key Seq.|:
  [0.9, 1.0]        5
  [0.8, 0.9)      29
  [0.7, 0.8)  7925


Exe. Time:
11.0 (sec.)
d1bupa1
(Res66-121)


|L|/|K|:  1.00
LCS len.:  51
jpg image jpg image
Z:  12.7
AR:  54
RMSD   0.1A
SI:  100%
d1s3xa1
(Res65-120)


|L|/|K|:  0.98
LCS len.  49
jpg image jpg image
Z:  11.9
AR:  53
RMSD:  0.2A
SI:  79%

[PDB] Transferase (3.30.30.40)
jpg image

1poiA02
(length 49)
|LCS|/|Key Seq.|:
  [0.9, 1.0]        3
  [0.8, 0.9)        3
  [0.7, 0.8)  2768


Exe. Time:
14.8 (sec.)
d1poia_
(Res116-168)


|L|/|K|:  1.00
LCS len.:  49
jpg image (identical)
Z:  -
AR:  49
RMSD   0.0A
SI:  100%
d1nh2a1
(Res71-123)


|L|/|K|:  0.80
LCS len.  39
jpg image jpg image
Z:  0.5
AR:  37
RMSD:  3.6A
SI:  8%


Translation initiation factor 2 beta, aIF2beta, N-terminal domain (3.30.30.50)
jpg image

1k8bA00
(length 48)
|LCS|/|Key Seq.|:
  [0.9, 1.0]          1
  [0.8, 0.9)   1552
  [0.7, 0.8) 35363


Exe. Time:
14.5 (sec.)
d1k8ba_

|L|/|K|:  1.00
LCS len.:  48
jpg image (identical)
Z:  -
AR:  48
RMSD   0.0A
SI:  100%
d1r9fa_
(Res67-118)


|L|/|K|:  0.88
LCS len.  42
jpg image No
significant
similarities
Z:  -
AR:  -
RMSD:  -A
SI:  -%


D-lysine 5,6-aminomutase beta subunit. Chain B. Domain 1 (3.30.30.60)
jpg image

1xrsB01
(length 48)
|LCS|/|Key Seq.|:
  [0.9, 1.0]          1
  [0.8, 0.9)   1184
  [0.7, 0.8) 36852


Exe. Time:
14.5 (sec.)
d1xrsb2

|L|/|K|:  1.00
LCS len.:  48
jpg image (identical)
Z:  -
AR:  48
RMSD   0.0A
SI:  100%
d1nioa_
(Res2-54)


|L|/|K|:  0.90
LCS len.  43
jpg image jpg image
Z:  0.3
AR:  26
RMSD:  3.4A
SI:  8%


Scorpion toxin-like (3.30.30.70)
jpg image

1uglA00
(length 46)
|LCS|/|Key Seq.|:
  [0.9, 1.0]          1
  [0.8, 0.9)   1109
  [0.7, 0.8) 29150


Exe. Time:
13.7 (sec.)
d1ugla_

|L|/|K|:  1.00
LCS len.:  46
jpg image (identical)
Z:  -
AR:  46
RMSD   0.0A
SI:  100%
d1b4ba_
(Res81-134)


|L|/|K|:  0.87
LCS len.  40
jpg image jpg image
Z:  0.6
AR:  34
RMSD:  3.7A
SI:  9%