<2-th target 11-th window (trimmed)> RATIO : lcs/trimmed_seq_a = 0.915 (= 65/ 71), lcs/trimmed_seq_b = 0.833 (= 65/ 78) SEQ A : name = ./CATH/alpha/orthogonal_bundle/Helicase/1.10.8.60/1lv7A02/1lv7A02.pdb c1 SEQ A : residue = VRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMM SEQ A : code = QAAAAAAAAAABQBG000QBG0QAAAAABG0R00QAAAAAAAAAAAAAAAABR0R000QAAAAAAAAAAAA SEQ A : lcs = QAAAAAAAAAABQBG000QBG0QAAAA-BG0R--QAAAAAAAAAAAAAAAABR0-0--QAAAAAAAAAAAA SEQ B : name = ./CATH/alpha/orthogonal_bundle/Helicase/1.10.8.60/1lv7A02/d1qkna_.ent c1 SEQ B : residue = SPEQLVLTLLEAEPPNVLVSRPSMPFTEASMMMSLTKLADKELVHMIGWAKKIPGFVELSLLDQVRLLESCWMEVLMVGLMWRSIDHPGKLIFAPDLVLDRDEGKCVEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILLNSSMYPLASANQEAESSRKLTHLLNAVTDALVWVIAKSGISSQQQSVRLANLLMLLSHVRHISNKGMEHLLSMKDLLLEML SEQ B : code = ----------------------------------------------------------------------1QAAAAAAAAAAABQBG0RG0RR0QBG000QAAAABG0RQAAAAAAAAAAAAAAAABR00QAAAAAAAAAAAAB0000---------------------------------------------------------------------------- SEQ B : lcs = -----------------------------------------------------------------------QAAAAAAAAAA-BQBG0--0--0QBG0--QAAAABG0RQAAAAAAAAAAAAAAAABR00QAAAAAAAAAAAA---------------------------------------------------------------------------------