<1-th target 1-th window (trimmed)> RATIO : lcs/trimmed_seq_a = 0.851 (= 63/ 74), lcs/trimmed_seq_b = 0.778 (= 63/ 81) SEQ A : name = ./CATH/alpha/orthogonal_bundle/Helicase/1.10.8.50/1mu5A02/1mu5A02.pdb c1 SEQ A : residue = HPYGVDREEIKILINNLKRDYTIKEFLVNEFQSIGDTTADKILELAGLKPNKKVKNLTEEEITRLVETFKKYED SEQ A : code = 0QAGG0QAAAAAAAABGRGR00QAAHAA0BG0R00QAAAAAAAAABR00QBG0QAB00QAAAAAAAAAAAGG1G SEQ A : lcs = 0Q-GG0QAAAAAAAABGRG-0-QAA-AA-BG0R00QAAAAAAAA-BR00QBG0QAB0-QAAAAAAAAAAA---- SEQ B : name = ./CATH/alpha/orthogonal_bundle/Helicase/1.10.8.50/1mu5A02/d1k82a1.ent c1 SEQ B : residue = EPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAVLLRSIEQGGT SEQ B : code = 0QBGQBG0QAAAAAAAABGRG0QAAAABGQAB00R00Q9AAAAAAAABR00QBG0QABG0QAAAAAAAAAAAAAAAAAAAB--- SEQ B : lcs = 0Q-G--G0QAAAAAAAABGRG0QAAAABG---0-R00Q-AAAAAAAABR00QBG0QAB-0QAAAAAAAAAAA------------