<4-th target 7-th window (trimmed)> RATIO : lcs/trimmed_seq_a = 0.770 (= 47/ 61), lcs/trimmed_seq_b = 0.701 (= 47/ 67) SEQ A : name = ./CATH/alpha/orthogonal_bundle/Helicase/1.10.8.60/1ypwA06/1ypmA06.pdb c1 SEQ A : residue = SRVAILKANLRKSDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESPVPEIRRDHFEEAM SEQ A : code = AAAAQAAQAJ00O300RRG00RQBG0RG0QAAAAAAAAAAAAAABGPJQAHQAHHR00R00 SEQ A : lcs = AAAA-AA-A-00O-00RRG00-QBG0R-0QAAAAAAAAAAAAAAB-PJ-------R00R00 SEQ B : name = ./CATH/alpha/orthogonal_bundle/Helicase/1.10.8.60/1ypwA06/d1un2a_.ent c1 SEQ B : residue = IRSASDIRDVFINAGIKGEEYDAAWNSFVVKSLVAQQEKAAADVQLRGVPAMFVNGKYQLNPQGMDTSNMDVFVQQYADTVKYLSEYEDGKQYTTLEKPVAGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNFMGGDLGKDLTQAWAVAMALGVEDKVTVPLFEGVQK SEQ B : code = ------------------------------------AAAAAAABR0R00O0000RRG0000QABG0RR0QAAAAAAAAAAAAAABPJ00RGR0000R0000R0------------------------------------------------------------------------------- SEQ B : lcs = ------------------------------------AAAAAAA----00O00--RRG00--Q-BG0R-0QAAAAAAAAAAAAAABPJ--R--00--R00-----------------------------------------------------------------------------------