<3-th target 27-th window (trimmed)> RATIO : lcs/trimmed_seq_a = 0.935 (= 58/ 62), lcs/trimmed_seq_b = 0.853 (= 58/ 68) SEQ A : name = ./CATH/alpha/orthogonal_bundle/Helicase/1.10.8.60/2chgA02/2chgA02.pdb c1 SEQ A : residue = KEAMKKRLLEICEKEGVKITEDGLEALIYISGGDFRKAINALQGAAAIGEVVDADTIYQITA SEQ A : code = QAAAAAAAAAAAAABR0000QAAAAAAAAABRR0QAAAAAAAAAAAABRG000QAAAAAAAA SEQ A : lcs = QAAAAAAAAAAAAABR0000QAAAAAAAAABRR0QAAAAAAAAAAA-BRG00-QAAAAAA-- SEQ B : name = ./CATH/alpha/orthogonal_bundle/Helicase/1.10.8.60/2chgA02/d1sxjb2.ent c1 SEQ B : residue = LPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSQCAILRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAGHGLVNADNVFKIV SEQ B : code = --------------------------------------------------------------------------------------------------------------------------------------------------------0000000QAAAAAAAAAAAAABR0000QAAAAAAAAABRR0QAAAAAAAAAAAB00RG00QAAAAAAB SEQ B : lcs = ---------------------------------------------------------------------------------------------------------------------------------------------------------------QAAAAAAAAAAAAABR0000QAAAAAAAAABRR0QAAAAAAAAAAAB--RG00QAAAAAA-