<1-th target 1-th window (trimmed)> RATIO : lcs/trimmed_seq_a = 0.902 (= 55/ 61), lcs/trimmed_seq_b = 0.821 (= 55/ 67) SEQ A : name = ./CATH/alpha/orthogonal_bundle/Helicase/1.10.8.50/2gybM01/2gybM01.pdb c1 SEQ A : residue = IAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKFV SEQ A : code = 00R000R0RG0QGQAAABGQG00QAAAAAAAAAB000QBG0QABG0QAAAAAAAAAAABG0 SEQ A : lcs = 00R000-0RG0Q--AAABGQG0-QAAAAAAAAAB00-QBG0QABG0QAAAAAAAAAAAB-0 SEQ B : name = ./CATH/alpha/orthogonal_bundle/Helicase/1.10.8.50/2gybM01/d1fjgm_.ent c1 SEQ B : residue = IAGVEIPRNKRVDVALTYIYGIGKARAKEALEKTGINPATRVKDLTEAEVVRLREYVENTWKLEGELRAEVAANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKTVAGKKKAP SEQ B : code = 00RR0000RG0QAAAAABGQ8G0QAAAAAAAAABR00QBG0QABG0QAAAAAAAAAAA1B0000QAA------------------------------------------------------ SEQ B : lcs = 00R-0000RG0QAAA--BGQ-G0QAAAAAAAAAB-00QBG0QABG0QAAAAAAAAAAA-B0------------------------------------------------------------