<2-th target 1-th window (trimmed)> RATIO : lcs/trimmed_seq_a = 0.760 (= 158/ 208), lcs/trimmed_seq_b = 0.693 (= 158/ 228) SEQ A : name = ./CATH/alpha_beta/2Layer_Sandwich/Oxidase/3.30.9.10/1c0pA02/1c0pA02.pdb c1 SEQ A : residue = VELVPTGHAMWLKGTRRFAQNEDGLLGHWYKDITPNYRPLPSSECPPGAIGVTYDTLSVHAPKYCQYLARELQKLGATFERRTVTSLEQAFDGADLVVNATGLGAKSIAGIDDQAAEPIRGQTVLVKSPCKRCTMDSSDPASPAYIIPRPGGEVICGGTYGVGDWDLSVNPETVQRILKHCLRLDPTISSDGTIEGIEVLRHNVGLRP SEQ A : code = AAAAABRR000R0R00000R0QAABRRRQBQAGG0R00000QABG00RG0000000000R1AAAAAAAAAAAAAB000000000R0QAAAB0RGRG000R00QAAA000QBR0QBG000000000000R0RG0000RRGQB0000000000RG000000000R0R0RG00QAAAAAAAAAAAAB0QABGR0RGQABG00000000000 SEQ A : lcs = --------000-0-00000-0QAABR--------0-00000QAB-00R-0000000000R-AAAAAAAAAAAAAB000000000R0QAAAB0----000R00QA--00-QB-0QB-000000000000-0RG000---GQB00000000---G000000000-0-0R-0-QAAAAAAAAAAAA---ABG-0R-QA--00000000000 SEQ B : name = ./CATH/alpha_beta/2Layer_Sandwich/Oxidase/3.30.9.10/1c0pA02/d1q0ba_.ent c130.9.1 SEQ B : residue = NIQVVVRCRPFNLAERKASAHSIVECDPVRKEVSVRTGGLADKSSRKTYTFDMVFGASTKQIDVYRSVVCPILDEVIMGYNCTIFAYGQTGTGKTFTMEGERSPNEEYTWEEDPLAGIIPRTLHQIFEKLTDNGTEFSVKVSLLEIYNEELFDLLNPSSDVSERLQMFDDPRNKRGVIIKGLEEITVHNKDEVYQILEKGAAKRTTAATLMNAYSSRSHSVFSVTIHMKETTIDGEELVKIGKLNLVDLAGSENINQSLLTLGRVITALVERTPHVPYRESKLTRILQDSLGGRTRTSIIATISPASLNLEETLSTLEYAHRAKNIL SEQ B : code = 000000000000QAAAABR000RG000QABR0000RR000QB000000000R0000QBG0QAAAAA001AAAAAAAAB000000000000RR0QAAAB000000RRR00QA00QB00QAAAAAAAAAAAAAB000000000000000RRG000QBGQBG0QBG0000000QG01BG0000R000000R0QABHAAAAAAAAAAAAAAAABG0RQAA0G0000000000--------------------------------------------------------------------------------------------------- SEQ B : lcs = --0000000000QAA--BR000--000QAB-00--R-000--0000000--R---------AAAAA---AAAAAAAAB000000000---R-0QAAAB0000--R--00QA00QB0-Q-------------B0000000000000--R-G000--GQB-0---0000000-G0---0000-000000R0Q------AAAAAAAAAAAAABG0RQA-0-0000000000---------------------------------------------------------------------------------------------------