<2-th target 1-th window (trimmed)> RATIO : lcs/trimmed_seq_a = 0.748 (= 193/ 258), lcs/trimmed_seq_b = 0.682 (= 193/ 283) SEQ A : name = ./CATH/alpha_beta/2Layer_Sandwich/Oxidase/3.30.9.10/1el5A02/1el5A02.pdb c1 SEQ A : residue = VPLALRSQELWYELEKETHHKIFTKTGVLVFGPKGESAFVAETMEAAKEHSLTVDLLEGDEINKRWPGITVPENYNAIFEPNSGVLFSENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIETANGSYTADKLIVSMGAWNSKLLSKLNLDIPLQPYRQVVGFFESDESKYSNDIDFPGFMVEVPNGIYYGFPSFGGCGLKLGYHTFGQKIDPDTINREFGVYPEDESNLRAFLEEYMPGANGELKRGAVCMYTK SEQ A : code = AAAAAAAAAAAAAAAAG0RG0000RR00000000RGGQAAAAAAAAAAABR00000000QAAAAB01BG000QBG00000QGG000R1AAAAAAAAAAAAAB000000R000000000R0000000QB00000R00000R0QAAB01QAABR00000000000000000RQB000QABRO0000000QB000000000RRR0000001BG00000QA000RG0RRGQAB1AAAAAAAAG00QABR000R000000000 SEQ A : lcs = AAAAAAAAAAAAAAAAG0--00--R-0000-------QAAAAAAAAAAA-----------AAAAB0------QB-00000-G-00-R-AAAAAAAAAAAAAB00000-R000000---R0000000--00000R00---R-QAA----AABR0000000000000000--QB00-QABR-0000---QB000000000R--000000-BG00000QA000--0R-GQAB-AAAAAAAAG00QABR---R000000000 SEQ B : name = ./CATH/alpha_beta/2Layer_Sandwich/Oxidase/3.30.9.10/1el5A02/d1ka1a_.ent c1 SEQ B : residue = ERELLVATQAVRKASLLTKRIQSEVISHKDSTTITKNDNSPVTTGDYAAQTIIINAIKSNFPDDKVVGEESSSGLSDAFVSGILNEIKANDEVYNKNYKKDDFLFTNDQFPLKSLEDVRQIIDFGNYEGGRKGRFWCLDPIDGTKGFLRGEQFAVCLALIVDGVVQLGCIGCPNLVLSSYGAQDLKGHESFGYIFRAVRGLGAFYSPSSDAESWTKIHVRHLKDTKDMITLEGVEKGHSSHDEQTAIKNKLNISKSLHLDSQAKYCLLALGLADVYLRLPIKLSYQEKIWDHAAGNVIVHEAGGIHTDAMEDVPLDFGNGRTLATKGVIASSGPRELHDLVVSTSCDVIQ SEQ B : code = QAAAAAAAAAAAAAAAAAAABQAAAAABQB2BG000QBR0000QAAAAAAAAAAAAAAAB0QB00000RG0R0R00QAAAAAAAAAAAAAAAAAAB00000RG0R00QB0RR00QAAAAAAAAABR0R00000000000R00RQAAAABRG0000000000RRG03000003QB00QAABRG0000RQAB000000000RG000000QBGQGG000000000O0QABG00000RGQAB00QAAAAAAAAABR00G000000QAAAAAAABRR00000000R0Q------------------------------------------------------------------- SEQ B : lcs = -AAAAAAAAAAAAAAAA---------------G000--R0000QAAAAAAAAAAAAAAAB0QB00000-G0-0R---AAAAAAAAAAAAA-----B00000R-0-00--0--00-----------R0-00000000000R00RQAAAABR-0000000000---0-00000-QB00QA-BR-0000-Q-B000000000R-000000-BG---00000------QA--0000-RGQAB---AAAAAAAA-----G00----Q------ABRR00000000-0--------------------------------------------------------------------