<1-th target 3-th window (trimmed)> RATIO : lcs/trimmed_seq_a = 0.805 (= 62/ 77), lcs/trimmed_seq_b = 0.738 (= 62/ 84) SEQ A : name = ./CATH/alpha_beta/Roll/UB_roll/3.10.20.10/1ibxA00/1ibxA00.pdb c1 SEQ A : residue = QKPKSVKLRALRSPRKFGVAGRSCQEVLRKGCLRFQLPERGSRLCLYEDGTELTEDYFPSVPDNAELVLLTLGQAWQ SEQ A : code = R0000000001R0R0000000RG1AAAAAGQAAABR000QB000001BRRO000QB00RRGQB00R000000RG000 SEQ A : lcs = -000000000-R0-0000000RG1AAAAA--AAAB-0--QB00000--RR-000--00RR-QB00R000000R-000 SEQ B : name = ./CATH/alpha_beta/Roll/UB_roll/3.10.20.10/1ibxA00/d1fil__.ent c1 SEQ B : residue = WNAYIDNLMADGTCQDAAIVGYKDSPSVWAAVPGKTFVNITPAEVGVLVGKDRSSFYVNGLTLGGQKCSVIRDSLLQDGEFSMDLRTKSTGGAPTFNVTVTKTDKTLVLLMGKEGVHGGLINKKCYEMASHLRRS SEQ B : code = --------------000000000R0000R0000RG1AAB00QAAAAAAB0QGRHBAAB00000RR00000R00RQBG0Q0RG00000000RR000000------------------------------------- SEQ B : lcs = --------------000000000R0000-0000RG1AA----AAAAAAB0Q------B00000RR00000R--RQB-0-0R-000000--R-000----------------------------------------