<1-th target 2-th window (trimmed)> RATIO : lcs/trimmed_seq_a = 0.966 (= 56/ 58), lcs/trimmed_seq_b = 0.889 (= 56/ 63) SEQ A : name = ./CATH/alpha_beta/Roll/UB_roll/3.10.20.10/1mhhF00/1mhhF00.pdb c1 SEQ A : residue = TIKVNLIFADGKIQTAEFKGTFEEATAEAYRYAALLAKVNGEWTADLEDGGNHMNIKF SEQ A : code = 00000000QBR0000000000QHAAAAAAAAAAAAAABAB00000000RRRRG00000 SEQ A : lcs = 00000000QBR0000000000Q-AAAAAAAAAAAAAA-AB00000000RRRRG00000 SEQ B : name = ./CATH/alpha_beta/Roll/UB_roll/3.10.20.10/1mhhF00/d1k52a_.ent c1 SEQ B : residue = HHHHHAMEEVTIKANLIFANGSTQTAEFKGTFEKATSEAYAYADTLKKDNGEWTVDVADGGYTLNIKF SEQ B : code = -----QB00000000000QBR0000000000QAAAAAAAAAAAAAAAAB000000000RRRRG00000 SEQ B : lcs = ----------00000000QBR0000000000QAAAAAAAAAAAAAAA-B00000000-RRRRG00000