<1-th target 3-th window (trimmed)> RATIO : lcs/trimmed_seq_a = 0.796 (= 39/ 49), lcs/trimmed_seq_b = 0.736 (= 39/ 53) SEQ A : name = ./CATH/alpha_beta/2Layer_Sandwich/Defensin/3.30.30.40/1poiA02/1poiA02.pdb c1 SEQ A : residue = FLPVTLMQGSGLTDEWGISKEVRKTLDKVPDDKFKYIDNPFKPGEKVVA SEQ A : code = 0000RGR0RGQAABG0R00QAAAABG0RG0RGR00000OQ0G0RG0000 SEQ A : lcs = 0000R-R0R-QAABG0R00QA----G0RG0RGR00000--0-0R-0000 SEQ B : name = ./CATH/alpha_beta/2Layer_Sandwich/Defensin/3.30.30.40/1poiA02/d1nh2a1.ent c1 SEQ B : residue = IVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKIGFAAKFT SEQ B : code = --------00000RRG00RQAAAAB0G0R0000QAG0RG00000RGR0000000QBR0000------------------------------ SEQ B : lcs = ---------0000RR-0-RQAA--B-G0R00--QAG0RG----0RGR0000000--R0000------------------------------