<1-th target 5-th window (trimmed)> RATIO : lcs/trimmed_seq_a = 0.844 (= 54/ 64), lcs/trimmed_seq_b = 0.771 (= 54/ 70) SEQ A : name = ./CATH/alpha_beta/Roll/UB_roll/3.10.20.30/1rwsA00/1rwsA00.pdb c1 SEQ A : residue = IKVKVIGRNIEKEIEWREGMKVRDILRAVGFNTESAIAKVNGKVVLEDDEVKDGDFVEVIPVVS SEQ A : code = 00000ORR0000000000RG0QAAAAAABRGRRQ800000RRG000QBR0000R000000RR01 SEQ A : lcs = 00000-RR0000000000RG0QAAAAA-BRGRR--00000RRG000---0000R000000--0- SEQ B : name = ./CATH/alpha_beta/Roll/UB_roll/3.10.20.30/1rwsA00/d1ayoa_.ent c1 SEQ B : residue = PFALEVQTLPQTCDGPKAHTSFQISLSVSYIGSRPASNMAIVDVKMVSGFIPLKPTVKMLERSNVSRTEVSNNHVLIYLDKVTNETLTLTFTVLQDIPVRDLKPAIVKVYDYYETDEFAVAEYSAP SEQ B : code = ------------------------000000RGRGR0000000000000RG00RQAAAAABRG0RGR00000RRG00000R000RG000000000-------------------------------- SEQ B : lcs = -------------------------00000R-R--0000000000---RG0--QAAAAABRG-R-R00000RRG00000-00-R-0000000----------------------------------