<2-th target 5-th window (trimmed)> RATIO : lcs/trimmed_seq_a = 0.767 (= 161/ 210), lcs/trimmed_seq_b = 0.697 (= 161/ 231) SEQ A : name = ./CATH/alpha_beta/2Layer_Sandwich/Oxidase/3.30.9.10/1ryiA02/1ryiA02.pdb c1 SEQ A : residue = GMFKLAFSEEDVLQLRQMDDLDSVSWYSKEEVLEKEPYASGDIFGASFIQDDVHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSGDVWANHVVVASGVWSGMFFKQLGLNNAFLPVKGECLSVWNDDIPLTKTLYHDHCYIVPRKSGRLVVGATMKPGDWSETPDLGGLESVMKKAKTMLPAIQNMKVDRFWAGLRP SEQ A : code = 000R00R0QAAAAAAAABQBGQBG0000QAAAAAB0QBG0QBGR00000QAR0000QAAAAAAAAAAAAAB000000RG00O000OG0RG00000QB00000R0000RR0QBQAAAAAABR0R00000000000000RR00000G0000RRG00000QBR0000000000R0RG3G00QAAAAAAAAAAAAB0QAAABG00000000000 SEQ A : lcs = -00R00R0QAAAAAAAA-----B-0000QAAAAAB0QBG-QBGR00000Q--000-QAAAAAAAAAAAAAB00000-RG00-000--0RG00000QB00000R0000RR0QBQAAAAAABR0-000-----------RR00000-000-R-G00000QB---------00R0RG-G00QAAAAAAAAAAAAB-Q---B-0000000---- SEQ B : name = ./CATH/alpha_beta/2Layer_Sandwich/Oxidase/3.30.9.10/1ryiA02/d1pj5a2.ent c1 SEQ B : residue = RIVIIGAGIVGTNLADELVTRGWNNITVLDQGPLNMPGGSTSHAPGLVFQTNPSKTMASFAKYTVEKLLSLTEDGVSCFNQVGGLEVATTETRLADLKRKLGYAAAWGIEGRLLSPAECQELYPLLDGENILGGLHVPSDGLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADGVIPADIVVSCAGFWGAKIGAMIGMAVPPDGGPLLGESKELDGFYVAEAVWVTHSAGVAKAMAELLTTGRSETDLGECDITRFEDVQLTPEYVSETSQQNFVEIYDVLHPLQPRL SEQ B : code = ----------------------------------------------------------------------G00RRG0RG0RR000000RGQAAAAAAAAAAAAAAABR0000000QAAAAAB0QBGRQABGR00000QBG000RQAAAAAAAAAAAAAB000001RG00R00000RRG000000QB00000R0000RR0QBQAAAAAABR00001RRG000000QG00RG0001R00QABQAAAAAAAAAAA80RG0RG0RQAG0QABG0QAAB0QAAAAAAAAAAAABQB0000QB000R SEQ B : lcs = -----------------------------------------------------------------------00R--0--0R------0--QAAAAAAAA-------B----0000QAAAAAB0QBG-Q-BGR00000Q--000-QAAAAAAAAAAAAAB00000-RG00-0000-R-G00000-QB00000R0000RR0QBQAAAAAABR0000-RR-000000--00RG000--00Q-B-------------0--0R-0R--G----G0----0QAAAAAAAAAAAABQB0000--000-