<1-th target 21-th window (trimmed)> RATIO : lcs/trimmed_seq_a = 0.855 (= 71/ 83), lcs/trimmed_seq_b = 0.780 (= 71/ 91) SEQ A : name = ./CATH/alpha_beta/Roll/UB_roll/3.10.20.30/1vjkA00/1vjkA00.pdb c1 SEQ A : residue = KVKVKYFARFRQLAGVDEEEIELPEGARVRDLIEEIKKRHEKFKEEVFGEGYDEDADVNIAVNGRYVSWDEELKDGDVVGVFP SEQ A : code = 00000000QAAAABRGR00000000R00QAAAAAAAAAB0QAAABG0000000QBGR00000RRG000QB00000R0000000 SEQ A : lcs = 00000000QAAAABRG-00000000R00QAAAAAAAAA---AAAB-000000-Q-GR00000R-G000--00000-000000- SEQ B : name = ./CATH/alpha_beta/Roll/UB_roll/3.10.20.30/1vjkA00/d1jbwa2.ent c1 SEQ B : residue = YTETVAYIHSFPRLAKTGDHRRILTLLHALGNPQQQGRYIHVTGTNGKGSAANAIAHVLEASGLTVGLYTSPFIMRFNERIMIDHEPIPDAALVNAVAFVRAALERLQQQQADFNVTEFEFITALAYWYFRQRQVDVAVIEVGIGGDTDSTNVITPVVSVLTEVALDHQKLLGHTITAIAKHAGIIKRGIPVVTGNLVPDAAAVVAAKVATTGSQWLRFDRDFSVPKAKLHGWGQRFTYEDQDGRISDLEVPLVGDYQQRNMAIAIQTAKVYAKQTEWPLTPQNIRQGLAA SEQ B : code = ----------------------------------------------------------------------------------------------------------------------------------------------------------------0R00000RQB000RGQAAAAABRQBG00R000000R00QAAAAAAAAAAAABR000000QG3000R000000RG0000000QB0000R000---------------------------------------- SEQ B : lcs = ------------------------------------------------------------------------------------------------------------------------------------------------------------------00000---000--QAAAA-BR--G00-000000R00QAAAAAAAAAAAAB-000000QG----R00000-RG0000000--0000-000----------------------------------------