<1-th target 1-th window (trimmed)> RATIO : lcs/trimmed_seq_a = 0.896 (= 43/ 48), lcs/trimmed_seq_b = 0.827 (= 43/ 52) SEQ A : name = ./CATH/alpha_beta/2Layer_Sandwich/Defensin/3.30.30.60/1xrsB01/1xrsB01.pdb c1 SEQ A : residue = QLSFTLPLKNNERSAEAAKQIALKMGLEEPSVVMQQSLDEEFTFFVVY SEQ A : code = 000000RG0R0QAAAAAAAAAHAAG000R00RR0000R0QBG000000 SEQ A : lcs = --0000RG-R0QAAAAAAAAA-AAG00-R00RR0000R0QBG000000 SEQ B : name = ./CATH/alpha_beta/2Layer_Sandwich/Defensin/3.30.30.60/1xrsB01/d1nioa_.ent c1 SEQ B : residue = VSFSLSGADSKSYSKFITALRKALPSKEKVSNIPLLLPSASGASRYILMQLSNYDAKAITMAIDVTNVYIMGYLVNSTSYFFNESDAKLASQYVFKGSTIVTLPYSGNYERLQNAAGKVREKIPLGFRAFDSAITSLFHYDSTAAAGAFLVIIQTTAEASRFKYIEGQIIKRIPKNEVPSPAALSLENEWSALSKQIQLAQTNNGAFRTPVVIIDNKGQRVEIKDVNSKVVTNNIKLLLNKQN SEQ B : code = 0000RGR00QAAAAAAAAAAAABG00R000RRG0000R0000QABG000000----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SEQ B : lcs = 0000RGR0-QAAAAAAAAAAA--G00R00-RR-0000R0---Q-BG000000-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------