(1-24)
 |
 |
 |
Z-Score:
4.0
AR: 71 RMSD: 6.2A SI: 34% |
|
| 1l6l A (len 74) | 1l6l
M (len 76) |
DaliLite result | ||
| site 1l6A EPCVESLVSQYFQTVTDYGKDLMEKVKSPELQAEAKSYFEKSKEQLTPLIKKAG TEL V NFLSYFVELGTQPATQ code --RQAAAAAAAAAAAAAAAAAAAAAAAAAAB000QBQAAQAAAAHAAAAAAAAA B0Q A AAAAAAABGQG001-- LCS RQAAAAAAAAAAAAAAAAAA AAAAAA B000 AAAAHAAAAAAAAA B Q A AAAAAAA G G00 code --0RRQAAAAAAAAAAAAAAAAAAHAAAAAA B000RH AAAAHAAAAAAAAAAB QBABGQAAAAAAAGGRG00G0-- 1l6M AKEPCVESLVSQYFQTVTDYGKDLMEKVKSP ELQAEA KSYFEKSKEQLTPLIK KAGTELVNFLSYFVELGTQPATQ site *RATIO : lcs/trimmed_seq_a = 0.829 (= 58/ 70), lcs/trimmed_seq_b = 0.806 (= 58/ 72) |
| Structural alignment by ComSubstruct + manual inspection |
| DSSP ..LLLHHHHHHHHHHHHHHHHHHHhHHHHHHHHhLLLLHHhHHHHHHHHHHHHHHHLLHHHHHHHHHHHHLLLLLL... 1l6A ..EPCVESLVSQYFQTVTDYGKDLmEKVKSPELqAEAKSYfEKSKEQLTPLIKKAGTELVNFLSYFVELGTQPATQ... |||||||||||||||||||||| | | 1l6M akEPCVESLVSQYFQTVTDYGKDL.MEKVKSPE.LQAEAK.SYFEKSKEQLTPLIKKAGTELVNFLSYFVELGTQPatq DSSP llLLLLHHHHHHHHHHHHHHHHLL.LHHHHHHH.HLLLLL.HHHHHHHHHHLHHHLHHHLLHHHHHHHHHHLLLLLlll *Z-score 4.0 AR 71 RMSD 6.2A SI 34% |
| Structural alignment by DaliLite |
(1-25)
|
|
 |
 |
Z-Score:
3.3
AR: 67 RMSD: 4.6A SI: 3% |
|
| 1l6l A (len 74) | 1l6l
N (len 76) |
DaliLite result | ||
| site 1l6A EPCVESLVSQYFQTVTDYGKDLMEKVKSPELQAEAKSYFEKSKEQLTPLI KKAGTELVNFLSY FVEL G TQPATQ code --RQAAAAAAAAAAAAAAAAAAAAAAAAAAB000QBQAAQAAAAHAAAAA AAAAB0QAAAAAA AABG Q G001-- LCS RQA A AAAA AAAAAAAA AA AAB 0Q AA AAAA AAAAA AAAA AAAAAA AAB Q G00 code --RQA1AHAAAABQQAAAAAAAABQAAGAABGR0Q AA AAAA AAAAAHAAAA AAAAAAB1AABRHQAABG00000-- 1l6N AKEPCVESLVSQYFQTVTDYGKDLMEKVKSPELQA EA KSYF EKSKEQLTPL IKKAGTELVNFLSYFVELGTQPATQ site *RATIO : lcs/trimmed_seq_a = 0.729 (= 51/ 70), lcs/trimmed_seq_b = 0.708 (= 51/ 72) |
| Structural alignment by ComSubstruct + manual inspection |
| DSSP LLLHHHHHHHhHHHHHHHHHHHHHhHHHHHHHLlllhhHHHHHHHHHHHHHHHHLLHHHHHHHHHHHHLLLLLL......... 1l6A EPCVESLVSQyFQTVTDYGKDLMEkVKSPELQAeaksyFEKSKEQLTPLIKKAGTELVNFLSYFVELGTQPATQ......... | | 1l6N AKEPCVESLV.SQYFQTVTDYGKD.LMEKVKSP.....ELQAEAKSYFEKSKEQLTPLIKKAGTELVNFLSYFVelgtqpatq DSSP LLLLLLLLHH.HLHHHHHHHHHHL.LLHHHHLL.....LLLHHHHHHHHHHHHHHHHHHHLHHHHLLHHHLLLLlllllllll *Z-score 3.3 AR 67 RMSD 4.6A SI 3% |
| Structural alignment by DaliLite |
(1-26)
 |
 |
 |
Z-Score:
4.2
AR: 70 RMSD: 5.1A SI: 40% |
|
| 1l6l B (len 74) | 1l6l
M (len 76) |
DaliLite result | ||
| site 1l6B EPCV ESLVSQYFQTVTDYGKDLM EKVKSPELQAEAKSYF EKSKEQLTPLIKKAGTELVNFLSYFVEL GTQPATQ code --01 QAAAAAAAAAAAAAAAAAA AAAAAAB00RRQAAAA AAAAAGAAAAAAAAABGQAAAAAAAAGR 0Q9AB-- LCS 0 QAAAAAAAAAAAAAAAAAA AAAAAAB00 R AAAA AAAAA AAAAA ABGQAAAAAAA GR 0 code --0RRQAAAAAAAAAAAAAAAAAAHAAAAAAB000RHAAAAHAAAAA AAAAABQBABGQAAAAAAAGGRG00G0-- 1l6M AKEPCVESLVSQYFQTVTDYGKDLMEKVKSPELQAEAKSYFEKSKEQ LTPLIKKAGTELVNFLSYFVELGTQPATQ site *RATIO : lcs/trimmed_seq_a = 0.829 (= 58/ 70), lcs/trimmed_seq_b = 0.806 (= 58/ 72) |
| Structural alignment by ComSubstruct + manual inspection |
| DSSP ...LLLLHHHHHHHHHHHHHHHHHhHHHHHLLL.LLLLLLLHHHHLHHHHhHHHHHHHLLHHHHHHLHHHHllLLLLL.. 1l6B ...EPCVESLVSQYFQTVTDYGKDlMEKVKSPE.LQAEAKSYFEKSKEQLtPLIKKAGTELVNFLSYFVELgtQPATQ.. |||||||| |||||||||||||||||||| 1l6M akePCVESLVSQYFQTVTDYGKDL.MEKVKSPElQAEAKSYFEKSKEQLT.PLIKKAGTELVNFLSYFVEL..GTQPAtq DSSP lllLLLHHHHHHHHHHHHHHHHLL.LHHHHHHHhLLLLLHHHHHHHHHHL.HHHLHHHLLHHHHHHHHHHL..LLLLLll *Z-score 4.2 AR 70 RMSD 5.1A SI 40% |
| Structural alignment by DaliLite |
(1-27)
|
|
 |
 |
Z-Score:
3.4
AR: 67 RMSD: 5.3A SI: 21% |
|
| 1l6l B (len 74) | 1l6l
N (len 76) |
DaliLite result | ||
| site 1l6B EPCVESLVSQYFQTVTDYGKDLMEK VK SPELQAEAKSYFEKSKEQLT PLIKKAGTELVNFLSYFVELGTQPATQ code --01QAAAAAAAAAAAAAAAAAAAA AA AAB00RRQAAAAAAAAAGAA AAAAAAABGQAAAAAAAAGR0Q9AB-- LCS QA A AAAA AAAAAAAA AA AAB R QAAAAAAAAA AA AAAAAAA AAA AA R Q AB code --RQA1AHAAAABQQAAAAAAAABQAAGAABG R0QAAAAAAAAA AAHAAAAAAA AAAB1AAB RHQAABG00000-- 1l6N AKEPCVESLVSQYFQTVTDYGKDLMEKVKSPE LQAEAKSYFEKS KEQLTPLIKK AGTELVNF LSYFVELGTQPATQ site *RATIO : lcs/trimmed_seq_a = 0.700 (= 49/ 70), lcs/trimmed_seq_b = 0.681 (= 49/ 72) |
| Structural alignment by ComSubstruct + manual inspection |
| DSSP ...LLLLHHHHhHHHHHHHHHHHHhHHHHHLLllLLLLLLHHHHLHHHHHHHHHHHHlLHHHHHHLHhHHLLlLLLL..... 1l6B ...EPCVESLVsQYFQTVTDYGKDlMEKVKSPelQAEAKSYFEKSKEQLTPLIKKAGtELVNFLSYFvELGTqPATQ..... |||||||||||| | | 1l6N akePCVESLVS.QYFQTVTDYGKD.LMEKVKS.pELQAEAKSYFEKSKEQLTPLIKK.AGTELVNFL.SYFV.ELGTqpatq DSSP lllLLLLLHHH.LHHHHHHHHHHL.LLHHHHL.lLLLHHHHHHHHHHHHHHHHHHHL.HHHHLLHHH.LLLL.LLLLlllll *Z-score 3.4 AR 67 RMSD 5.3A SI 21% |
| Structural alignment by DaliLite |
(1-28)
 |
 |
 |
Z-Score:
3.9
AR: 73 RMSD: 4.7A SI: 4% |
|
| 1l6l C (len 76) | 1l6l
M (len 76) |
DaliLite result | ||
| site 1l6C AKEPCVESLVSQYFQTVTDYGKDLMEKVKSPELQAE AKSY FEKSKEQLTPLIKKAGTELVNFLSYFVEL GT QPATQ code --000QQAAAAAAAAAAAAAAAAAAAAAAAAAABGQ AAAA AAAA1QAAAAAAAAAABGQAAAAAAAAAB 00 01Q-- LCS 0 QAAAAAAAAAAAAAAAAAA AAAAAA B AAAA AAAA AAAAAA ABGQAAAAAAA 00 0 code --0RRQAAAAAAAAAAAAAAAAAAHAAAAAA B000RHAAAAHAAAA AAAAAABQBABGQAAAAAAAGGRG00G0-- 1l6M AKEPCVESLVSQYFQTVTDYGKDLMEKVKSP ELQAEAKSYFEKSKE QLTPLIKKAGTELVNFLSYFVELGTQPATQ site *RATIO : lcs/trimmed_seq_a = 0.764 (= 55/ 72), lcs/trimmed_seq_b = 0.764 (= 55/ 72) |
| Structural alignment by ComSubstruct + manual inspection |
| DSSP .LLLLL.LHHHHHHHHHHHHHHHhHHHHHHHHHH.HLLLLHHHHHLLLLLLLLLLHHHHLLHHHHHHHHhHLLLLLLLl 1l6C .AKEPC.VESLVSQYFQTVTDYGkDLMEKVKSPE.LQAEAKSYFEKSKEQLTPLIKKAGTELVNFLSYFvELGTQPATq | | | 1l6M aKEPCVeSLVSQYFQTVTDYGKD.LMEKVKSPELqAEAKSYFEKSKEQLTPLIKKAGTELVNFLSYFVE.LGTQPATQ. DSSP lLLLLLhHHHHHHHHHHHHHHHL.LLHHHHHHHHlLLLLHHHHHHHHHHLHHHLHHHLLHHHHHHHHHH.LLLLLLLL. *Z-score 3.9 AR 73 RMSD 4.7A SI 4% |
| Structural alignment by DaliLite |
(1-29)
 |
 |
 |
Z-Score:
4.4
AR: 72 RMSD: 5.9A SI: 81% |
|
| 1l6l G (len 74) | 1l6l
M (len 76) |
DaliLite result | ||
| site 1l6G AKEPCVESLVSQYFQTVTDYGKDLMEKVKSPELQAEAKSYFEKSKEQLTPLIKKAGTEL VNF LSYFVELGTQPA code --0RRQAAAAAAAAAAAAAAAAAAAAAAAAAAAG0QAAAAAAAAAAAAAAAAAAAAB0Q AAA AAAAAAAB1Q-- LCS 0RRQAAAAAAAAAAAAAAAAAA AAAAAA 0 AAAA AAAAAAAAAA B Q A AAAAAAA code --0RRQAAAAAAAAAAAAAAAAAAHAAAAAAB000RHAAAAHAAAAAAAAAA B QBABGQAAAAAAAGGRG00G0-- 1l6M AKEPCVESLVSQYFQTVTDYGKDLMEKVKSPELQAEAKSYFEKSKEQLTPLI K KAGTELVNFLSYFVELGTQPATQ site *RATIO : lcs/trimmed_seq_a = 0.757 (= 53/ 70), lcs/trimmed_seq_b = 0.736 (= 53/ 72) |
| Structural alignment by ComSubstruct + manual inspection |
| DSSP LLLLLHHHHHHHHHHHHHHHHHHhHHHHHHHHHL.LLLHHHHHHHHHHHLHHHHHHHHLLLHHHHHHHHHlLLLL... 1l6G AKEPCVESLVSQYFQTVTDYGKDlMEKVKSPELQ.AEAKSYFEKSKEQLTPLIKKAGTELVNFLSYFVELgTQPA... ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| 1l6M AKEPCVESLVSQYFQTVTDYGKD.LMEKVKSPELqAEAKSYFEKSKEQLTPLIKKAGTELVNFLSYFVEL.GTQPatq DSSP LLLLLLHHHHHHHHHHHHHHHHL.LLHHHHHHHHlLLLLHHHHHHHHHHLHHHLHHHLLHHHHHHHHHHL.LLLLlll *Z-score 4.4 AR 72 RMSD 5.9A SI 81% |
| Structural alignment by DaliLite |
(1-30)
|
|
 |
 |
Z-Score:
4.0
AR: 72 RMSD: 5.9A SI: 94% |
|
| 1l6l G (len 74) | 1l6l
N (len 76) |
DaliLite result | ||
| site 1l6G AKEPCVESLVSQYFQTVTDYGKDLMEKVKSPELQ AEAKSYFEKSKEQ LTPLIKKAGTELV NFLSYFVELGTQPA code --0RRQAAAAAAAAAAAAAAAAAAAAAAAAAAAG 0QAAAAAAAAAAA AAAAAAAAAB0QA AAAAAAAAAB1Q-- LCS RQA A AAAA AAAAAAAA AA AA G 0QAAAAAAAAAAA AAAAAAAAA A AA AAB code --RQA1AHAAAABQQAAAAAAAABQAAGAABGR0QAAAAAAAAAAAHAAAAAAAAA AB1AABRHQAABG00000-- 1l6N AKEPCVESLVSQYFQTVTDYGKDLMEKVKSPELQAEAKSYFEKSKEQLTPLIKKAG TELVNFLSYFVELGTQPATQ site *RATIO : lcs/trimmed_seq_a = 0.700 (= 49/ 70), lcs/trimmed_seq_b = 0.681 (= 49/ 72) |
| Structural alignment by ComSubstruct + manual inspection |
| DSSP LLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHLHHHHHHHHLLLHHHHHHHHhlLLLL.... 1l6G AKEPCVESLVSQYFQTVTDYGKDLMEKVKSPELQAEAKSYFEKSKEQLTPLIKKAGTELVNFLSYFVElgTQPA.... |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 1l6N AKEPCVESLVSQYFQTVTDYGKDLMEKVKSPELQAEAKSYFEKSKEQLTPLIKKAGTELVNFLSYFVE..LGTQpatq DSSP LLLLLLLLHHHLHHHHHHHHHHLLLHHHHLLLLLHHHHHHHHHHHHHHHHHHHLHHHHLLHHHLLLLL..LLLLllll *Z-score 4.0 AR 72 RMSD 5.9A SI 94% |
| Structural alignment by DaliLite |
(1-31)
 |
 |
 |
Z-Score:
3.1
AR: 66 RMSD: 4.2A SI: 2% |
|
| 1l6l H (len 74) | 1l6l
M (len 76) |
DaliLite result | ||
| site 1l6H AKEPCVESLVSQYFQTVTDYGKDLM EKVKSPELQAEAKSYFEKSKEQLTPLIKKA GTELVNFLSYFVELGTQPA code --00RHQAAAAAAAAAAAAAAAAAA AAAAAAB001RHQAAAAAAAAAAAAAAAAA ABGQAAAAAAAAAAGAA-- LCS 0R QAAAAAAAAAAAAAAAAAA AAAAAAB00 RH AAAA AAAAAAAAAA ABGQAAAAAAA G code --0RRQAAAAAAAAAAAAAAAAAAHAAAAAAB000RH AAAAHAAAAAAAAAABQBABGQAAAAAAAGGRG00G0-- 1l6M AKEPCVESLVSQYFQTVTDYGKDLMEKVKSPELQAEA KSYFEKSKEQLTPLIKKAGTELVNFLSYFVELGTQPATQ site *RATIO : lcs/trimmed_seq_a = 0.829 (= 58/ 70), lcs/trimmed_seq_b = 0.806 (= 58/ 72) |
| Structural alignment by ComSubstruct + manual inspection |
| DSSP ...LLLL..LLHHHHHHHHHHHHHhHHHHHHHHHHHhllllLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHLLL... 1l6H ...AKEP..CVESLVSQYFQTVTDyGKDLMEKVKSPelqaeAKSYFEKSKEQLTPLIKKAGTELVNFLSYFVelGTQPA... | 1l6M akePCVEslVSQYFQTVTDYGKDL.MEKVKSPELQA...eaKSYFEKSKEQLTPLIKKAGTELVNFLSYFVE..LGTQPatq DSSP lllLLLHhhHHHHHHHHHHHHHLL.LHHHHHHHHLL...llLHHHHHHHHHHLHHHLHHHLLHHHHHHHHHH..LLLLLlll *Z-score 3.1 AR 66 RMSD 4.2A SI 2% |
| Structural alignment by DaliLite |
(1-32)
|
|
 |
 |
Z-Score:
2.4
AR: 63 RMSD: 4.5A SI: 3% |
|
| 1l6l H (len 74) | 1l6l
N (len 76) |
DaliLite result | ||
| site 1l6H AKEPCVESLVSQYFQTVTDYGKDLMEK VK SPELQAEAKSYFEKSKEQLT PLIKKAGTELVNFLSYFV EL GTQPA code --00RHQAAAAAAAAAAAAAAAAAAAA AA AAB001RHQAAAAAAAAAAA AAAAAAABGQAAAAAAAA AA GAA-- LCS R QA A AAAA AAAAAAAA AA AAB R QAAAAAAAAAAA AAAAAAA AAA AA AA G code --R QA1AHAAAABQQAAAAAAAABQAAGAABG R0QAAAAAAAAAAAHAAAAAAA AAAB1AABRHQAABG00000-- 1l6N AKE PCVESLVSQYFQTVTDYGKDLMEKVKSPE LQAEAKSYFEKSKEQLTPLIKK AGTELVNFLSYFVELGTQPATQ site *RATIO : lcs/trimmed_seq_a = 0.700 (= 49/ 70), lcs/trimmed_seq_b = 0.681 (= 49/ 72) |
| Structural alignment by ComSubstruct + manual inspection |
| DSSP ....LLLL.LLHHHHHHHHHHHHhHHHHHHHHHhhhhlllllHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHLLL..... 1l6H ....AKEP.CVESLVSQYFQTVTdYGKDLMEKVkspelqaeaKSYFEKSKEQLTPLIKKAGTELVNFLSYfVELGTQPA..... | | 1l6N akepCVESlVSQYFQTVTDYGKD.LMEKVKSPE......lqaEAKSYFEKSKEQLTPLIKKAGTELVNFL.SYFVELGTqpatq DSSP llllLLLLhHHLHHHHHHHHHHL.LLHHHHLLL......llhHHHHHHHHHHHHHHHHHHLHHHHLLHHH.LLLLLLLLlllll *Z-score 2.4 AR 63 RMSD 4.5A SI 3% |
| Structural alignment by DaliLite |
(1-33)
 |
 |
 |
Z-Score:
3.0
AR: 65 RMSD: 6.5A SI: 8% |
|
| 1l6l J (len 74) | 1l6l
M (len 76) |
DaliLite result | ||
| site 1l6J EPCVESLVSQYFQTVTDYGKDLMEKVKSPELQAEAKSYFE KSKE QLTPLIKKAGTEL V NFLSYFV ELGTQPATQ code --G1QAAAAAAAAAAAAAAAAAAAAHB1QAAG0QBQAAAA AAAA AAAAAAAAAABHQ A AAAAAAA 0BH0G00-- LCS QAAAAAAAAAAAAAAAAAA H AA AAAA AAAA AAAAAAAAAAB Q A AAAAAAA 0 0G0 code --0RRQAAAAAAAAAAAAAAAAAA H AA AAAAB000RHAAAAHAAAAAAAAAAB QBABGQAAAAAAAGGRG0 0G0-- 1l6M AKEPCVESLVSQYFQTVTDYGKDL M EK VKSPELQAEAKSYFEKSKEQLTPLIK KAGTELVNFLSYFVELGT QPATQ site *RATIO : lcs/trimmed_seq_a = 0.771 (= 54/ 70), lcs/trimmed_seq_b = 0.750 (= 54/ 72) |
| Structural alignment by ComSubstruct + manual inspection |
| DSSP llllHHHHhhHHHHHHHHHHHHHHLLLLHhHHHLLHHHH.HHHHhHHHHHHHHHHHLHHHHHhHHHH.LLLL..LLLL....... 1l6J epcvESLVsqYFQTVTDYGKDLMEKVKSPeLQAEAKSYF.EKSKeQLTPLIKKAGTELVNFLsYFVE.LGTQ..PATQ....... | || | | 1l6M ....AKEP..CVESLVSQYFQTVTDYGKD.LMEKVKSPElQAEA.KSYFEKSKEQLTPLIKK.AGTElVNFLsyFVELgtqpatq DSSP ....LLLL..LLHHHHHHHHHHHHHHHHL.LLHHHHHHHhLLLL.LHHHHHHHHHHLHHHLH.HHLLhHHHHhhHHHLlllllll *Z-score 3.0 AR 65 RMSD 6.5A SI 8% |
| Structural alignment by DaliLite |
(1-34)
|
|
 |
 |
Z-Score:
1.5
AR: 53 RMSD: 10.1A SI: 8% |
|
| 1l6l J (len 74) | 1l6l
N (len 76) |
DaliLite result | ||
| site 1l6J EPCVESLVSQYFQ TVTDYGKD LM EKVKSPELQ AEAKSYFEKSKEQLT PLIKKAGTELVNF LSY FVELGTQPATQ code --G1QAAAAAAAA AAAAAAAA AA AAHB1QAAG 0QBQAAAAAAAAAAA AAAAAAABHQAAA AAA AA0BH0G00-- LCS QA A AAAA AAAAAAAA AA AA B G 0Q AAAAAAAAAAA AAAAAAA AAA AA AA B G00 code --RQA1AHAAAABQQAAAAAAAABQAAGAA B GR0Q AAAAAAAAAAAHAAAAAAA AAAB1AABRHQAA B G00000-- 1l6N AKEPCVESLVSQYFQTVTDYGKDLMEKVKS P ELQA EAKSYFEKSKEQLTPLIKK AGTELVNFLSYFV E LGTQPATQ site *RATIO : lcs/trimmed_seq_a = 0.743 (= 52/ 70), lcs/trimmed_seq_b = 0.722 (= 52/ 72) |
| Structural alignment by ComSubstruct + manual inspection |
| DSSP .....LLLLHHHHHHHHHHHHHHHHHHHhllllhhhhhllhhhhhhhhhHHHHHHHHHHHLHHHHHHHHHHLLL...LLLLL........... 1l6J .....EPCVESLVSQYFQTVTDYGKDLMekvkspelqaeaksyfekskeQLTPLIKKAGTELVNFLSYFVELGT...QPATQ........... | | || 1l6N akepcVESLVSQYFQTVTDYGKDLMEKV.................kspeLQAEAKSYFEKSKEQLTPLIKKAGTelvNFLSYfvelgtqpatq DSSP lllllLLLHHHLHHHHHHHHHHLLLHHH.................hlllLLHHHHHHHHHHHHHHHHHHHLHHHhLLHHHLLlllllllllll *Z-score 1.5 AR 53 RMSD 10.1A SI 8% |
| Structural alignment by DaliLite |
(1-35)
 |
 |
 |
Z-Score:
3.4
AR: 66 RMSD: 4.6A SI: 6% |
|
| 1l6l N (len 76) | 1l6l
S (len 74) |
DaliLite result | ||
| site
1l6N AKEPCVESLVSQYFQTVTDYGKDLMEKVKSPELQAEAKSYFEK SK EQLTP LIKKAGTELVNFLSYFV E LGTQPATQ code --RQA1AHAAAABQQAAAAAAAABQAAGAABGR0QAAAAAAAA AA AHAAA AAAAAAAB1AABRHQAA B G00000-- LCS RQA A AAAA AAAAAAAA AA AA AAAAAAAA AA A AAA AAAAAAA AAB QAA B G00 code --RQA A AAAA AAAAAAAA AA AA AAAAAAAAB000QBQAAQA AAAHAAAAAAA AAB0 QAAAAAAAAAB1QG00-- 1l6S EPCVE S LVSQ YFQTVTDY GK DL MEKVKSPELQAEAKSYFEK SKEQLTPLIKK AGTE LVNFLSYFVELGTQPATQ site *RATIO : lcs/trimmed_seq_a = 0.708 (= 51/ 72), lcs/trimmed_seq_b = 0.729 (= 51/ 70) |
| Structural alignment by ComSubstruct + manual inspection |
| DSSP LLLLLLLLHH.HLHHHHHHHHHHL.LLHHHHLL.....LLLHHHHHHHHHHHHHHHHHHHL.HHHHLLHHHLLLllllllllll 1l6N AKEPCVESLV.SQYFQTVTDYGKD.LMEKVKSP.....ELQAEAKSYFEKSKEQLTPLIKK.AGTELVNFLSYFvelgtqpatq | | || 1l6S EPCVESLVSQyFQTVTDYGKDLMEkVKSPELQAeaksyFEKSKEQLTPLIKKAGTELVNFLsYFVELGTQPATQ.......... DSSP LLLHHHHHHHhHHHHHHHHHHHHHhHHHHHHHLlllhhHHHHHHHHHHHHHHHHLLHHHHHhHHHHLLLLLLLL.......... *Z-score 3.4 AR 66 RMSD 4.6A SI 6% |
| Structural alignment by DaliLite |
(1-36)
|
|
 |
 |
Z-Score:
3.3
AR: 69 RMSD: 4.4A SI: 6% |
|
| 1l6l N (len 76) | 1l6l
U (len 76) |
DaliLite result | ||
| site 1l6N AKEPCVESLVSQYFQTVTDYGKDLMEKVKSP ELQAEAKSYFEKSKEQLTPLIKKAGTEL VNFL SYFVELGTQPATQ code --RQA1AHAAAABQQAAAAAAAABQAAGAAB GR0QAAAAAAAAAAAHAAAAAAAAAAB1 AABR HQAABG00000-- LCS QA A AAAA AAAAAAAA AA AAB G QAAAAAAAAAAA AAAAAAAAA B AA H AA code --000QA AAAAAAAAAAAAAAAAAAAAAAAABAGG QAAAAAAAAAAA AAAAAAAAA BGQAAAAAAAAAAAHAAA-- 1l6U AKEPCVE SLVSQYFQTVTDYGKDLMEKVKSPELQA EAKSYFEKSKEQ LTPLIKKAG TELVNFLSYFVELGTQPATQ site *RATIO : lcs/trimmed_seq_a = 0.667 (= 48/ 72), lcs/trimmed_seq_b = 0.667 (= 48/ 72) |
| Structural alignment by ComSubstruct + manual inspection |
| DSSP ..LLLLLLLLHHH.LHHHHHHHHHHLLLHHHHLLL..LLHHHHHHHHHHHHHHHHHHHL.HHHHLLHHH.LLLLLLlllllll 1l6N ..AKEPCVESLVS.QYFQTVTDYGKDLMEKVKSPE..LQAEAKSYFEKSKEQLTPLIKK.AGTELVNFL.SYFVELgtqpatq | || | 1l6U akEPCVESLVSQYfQTVTDYGKDLMEKVKSPELQAeaKSYFEKSKEQLTPLIKKAGTELvNFLSYFVELgTQPATQ....... DSSP llLLLHHHHHHHHhHHHHHHHHHHHHHHHHHHHLLllHHHHHLLLLLLLHHHHHHHHLHhHHHHHHHHHhHLLLLL....... *Z-score 3.3 AR 69 RMSD 4.4A SI 6% |
| Structural alignment by DaliLite |
(1-37)
 |
 |
 |
Z-Score:
3.8
AR: 69 RMSD: 6.1A SI: 32% |
|
| 1l6l M (len 76) | 1l6l
S (len 74) |
DaliLite result | ||
| site 1l6M AKEPCVESLVSQYFQTVTDYGKDLMEKVKSP ELQAEA KS YFEKS KEQLTPLIKKAGTELVNFLSYFVEL GTQPATQ code --0RRQAAAAAAAAAAAAAAAAAAHAAAAAA B000RH AA AAHAA AAAAAAAABQBABGQAAAAAAAGGR G00G0-- LCS RQAAAAAAAAAAAAAAAAAA AAAAAA B000 AA AA AA AAAAAAAA AB QAAAAAAA G00 code --RQAAAAAAAAAAAAAAAAAAAAAAAAAAB000QBQAAQAA AAHAAAAAAAA AB0QAAAAAAAAAB1QG00-- 1l6S EPCVESLVSQYFQTVTDYGKDLMEKVKSPELQAEAKSYFEKS KEQLTPLIKKA GTELVNFLSYFVELGTQPATQ site *RATIO : lcs/trimmed_seq_a = 0.792 (= 57/ 72), lcs/trimmed_seq_b = 0.814 (= 57/ 70) |
| Structural alignment by ComSubstruct + manual inspection |
| DSSP llLLLLHHHHHHHHHHHHHHHHL.LLHHHHHHH..HLLL.LLHHHHHHHHHHLHHHLH.HHLLHHHHHHHHHHLLLlllll 1l6M akEPCVESLVSQYFQTVTDYGKD.LMEKVKSPE..LQAE.AKSYFEKSKEQLTPLIKK.AGTELVNFLSYFVELGTqpatq ||||||||||||||||||||| | 1l6S ..EPCVESLVSQYFQTVTDYGKDlMEKVKSPELqaEAKSyFEKSKEQLTPLIKKAGTElVNFLSYFVELGTQPATQ..... DSSP ..LLLHHHHHHHHHHHHHHHHHHhHHHHHHHHHhlLLLHhHHHHHHHHHHHHHHHHLLhHHHHHHHHHLLLLLLLL..... *Z-score 3.8 AR 69 RMSD 6.1A SI 32% |
| Structural alignment by DaliLite |
(1-38)
|
|
 |
 |
Z-Score:
3.9
AR: 72 RMSD: 5.2A SI: 17% |
|
| 1l6l M (len 76) | 1l6l
U (len 76) |
DaliLite result | ||
| site 1l6M AKEPCVESLVSQYFQTVTDYGKDLMEKVKSPELQAEAK SYFEKSKEQLTPLI KKAGTELVNFLSYFVELGTQPATQ code --0RRQAAAAAAAAAAAAAAAAAAHAAAAAAB000RHA AAAHAAAAAAAAAA BQBABGQAAAAAAAGGRG00G0-- LCS 0 QAAAAAAAAAAAAAAAAAA AAAAAAB A AAA AAAAAAAAAA ABGQAAAAAAA code --000 QAAAAAAAAAAAAAAAAAAAAAAAAAB AGGQAAAAAAAAAAAAAAAAAAAABGQAAAAAAAAAAAHAAA-- 1l6U AKEPC VESLVSQYFQTVTDYGKDLMEKVKSPE LQAEAKSYFEKSKEQLTPLIKKAGTELVNFLSYFVELGTQPATQ site *RATIO : lcs/trimmed_seq_a = 0.722 (= 52/ 72), lcs/trimmed_seq_b = 0.722 (= 52/ 72) |
| Structural alignment by ComSubstruct + manual inspection |
| DSSP lLLLLLHHHHHHHHHHHHHHHHL.LLHHHHHHHHllLLLHHHHHHHHHHLHHHLHHHLLHHHHHHHHH.HLLL..LLLLl 1l6M aKEPCVESLVSQYFQTVTDYGKD.LMEKVKSPELqaEAKSYFEKSKEQLTPLIKKAGTELVNFLSYFV.ELGT..QPATq |||||||||| | | 1l6U .AKEPCVESLVSQYFQTVTDYGKdLMEKVKSPEL..QAEAKSYFEKSKEQLTPLIKKAGTELVNFLSYfVELGtqPATQ. DSSP .LLLLLHHHHHHHHHHHHHHHHHhHHHHHHHHHH..LLLLHHHHHLLLLLLLHHHHHHHHLHHHHHHHhHHHHhlLLLL. *Z-score 3.9 AR 72 RMSD 5.2A SI 17% |
| Structural alignment by DaliLite |
[The DSSP code]
- H = alpha helix
- B = residue in isolated beta-bridge
- E = extended strand, participates in beta ladder
- G = 3-helix (3/10 helix)
- I = 5 helix (pi helix)
- T = hydrogen bonded turn
- S = bend
- L = no assigned structure
[The 5-tile code]
- 0 = DDDDD (extended strand, small blue spheres)
- 1 = DDDDU
- 2 = DDDUD
- 3 = DDDUU
- 8 = DUDDD
- 9 = DUDDU
- A = DUDUD (helix, large red spheres)
- B = DUDUU (turn, large yellow spheres)
- G = UDDDD
- H = UDDDU
- I = UDDUD
- J = UDDUU
- O = UUDDD
- P = UUDDU
- Q = UUDUD (turn, large yellow spheres)
- R = UUDUU (turn, large yellow spheres)