[From cluster 32 to cluster 35]


(1) Cluster 32

(1-1)
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   Z-Score: 4.1
AR: 66
RMSD: 7.7A
SI: 53%
2ou1 B (len 71) 1l6l 2 (len 73)
DaliLite result

site 
2ou1 EPCVSLVSQYQTVTDYGKDLMEKVKSPELQAEAKS     YFEKSKEQL TPLIKKAGTELVNFLSYFVELGTQPAT
code --RHRAAAAAAAAAAAAAAAAAAAAAAB00RGQAA     AAAAAAAAA AAAAAAAAAG1AAAAAAAAAAB1AA--

LCS       AAAAAAAAAAAAAAAAAAAA  B    QAA     AAAAAAAAA AAAAAAAAA  AAAAAAAA
code  --0PAAAAAAAAAAAAAAAAAAAAH B1   QAAG0QBQAAAAAAAAA1AAAAAAAAAHQAAAAAAAAGG00000--
1l6l  EPCVSLVSQYFQTVTDYGKDLMEKV KS   PELQAEAKSYFEKSKEQLTPLIKKAGTELVNFLSYFVELGTQPATQ
site 


*RATIO :  lcs/trimmed_seq_a = 0.746 (=   50/   67), lcs/trimmed_seq_b = 0.725 (=   50/   69)
Structural alignment by ComSubstruct + manual inspection
DSSP LLLL.LHHHHL.LHHHHHHHHHHHHHHLLLLLLlHHHHHHHLLLLHHHHHHLHHHHHHHHHHHHHhhHHLL...ll
2ou1 EPCV.SLVSQY.QTVTDYGKDLMEKVKSPELQAeAKSYFEKSKEQLTPLIKKAGTELVNFLSYFVelGTQP...at
     ||||                              |||||||||||||||||||||||||||||||
1l6l EPCVsLVSQYFqTVTDYGKDLMEKVKSPELQAE.AKSYFEKSKEQLTPLIKKAGTELVNFLSYFV..ELGTqpatq
DSSP LLLLlLHHHHHhHHHHHHHHHHHLLLLHHHHLL.LHHHHHHHHHHHHHHHHHLHHHHHHHHHHHL..LLLLlllll


*Z-score 4.1  AR 66  RMSD 7.7A  SI 53%
Structural alignment by DaliLite

(1-2)
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   Z-Score: 4.7
AR: 68
RMSD: 5.2A
SI: 60%
2ou1 B (len 71) 1l6l F (len 75)
DaliLite result

site 
2ou1   EPCVSLVSQYQTVTDYGKDLMEKVKSP  ELQAEAKSYFEKSKEQLTPLIKKAGTELVNFLSYFVELGTQPAT
code   --RHRAAAAAAAAAAAAAAAAAAAAAA  B00RGQAAAAAAAAAAAAAAAAAAAAG1AAAAAAAAAAB1AA--

LCS         AAAAAAAAAAAAAAAAAAAAAA  B00    AAAAAAAAAAAAAAAAAA   AAAAAAAAA B1
code --000PQAAAAAAAAAAAAAAAAAAAAAAAAB00 001AAAAAAAAAAAAAAAAAAB0QAAAAAAAAA B1QBG0--
1l6l AKEPCVSLVSQYFQTVTDYGKDLMEKVKSPELQA EAKSYFEKSKEQLTPLIKKAGTELVNFLSYFVE LGTQPATQ
site 


*RATIO :  lcs/trimmed_seq_a = 0.806 (=   54/   67), lcs/trimmed_seq_b = 0.761 (=   54/   71)
Structural alignment by ComSubstruct + manual inspection
DSSP LLLLLHhHHLLHHHHHHHHHHHHHHLLLLL....lLHHHHHHHLLLLHHHHHHLHHHHHHHHHHHHHHHHHLLL.l
2ou1 EPCVSLvSQYQTVTDYGKDLMEKVKSPELQ....aEAKSYFEKSKEQLTPLIKKAGTELVNFLSYFVELGTQPA.t
            |          |                |||||||||||||||||||||||||||||||||||||||
1l6l AKEPCV.SLVSQYFQTVTDYGKDLMEKVKSpelqaEAKSYFEKSKEQLTPLIKKAGTELVNFLSYFVELGTQPAtq 
DSSP LLLLLL.LHHHHHHHHHHHHHHHHHHHHHHhhlllLLLHHHHHHHHHHHHHHHHHHHLHHHHHHHHHHLLLLLLll

*Z-score 4.7  AR 68  RMSD 5.2A  SI 60%
Structural alignment by DaliLite

(1-3)
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   Z-Score: 4.3
AR: 68
RMSD: 7.1A
SI: 4%
2ou1 B (len 71) 1l6l Z (len 72)
DaliLite result

site 
2ou1 EPCVS  LVSQYQTVTDYGKDLMEKVKSP ELQAE AKSYFEKSKEQLTPLIKKAGTELVNFLSYFVELGTQPAT
code --RHR  AAAAAAAAAAAAAAAAAAAAAA B00RG QAAAAAAAAAAAAAAAAAAAAG1AAAAAAAAAAB1AA--

LCS      R  AAAAAAAAAAAAAAAAAAAAAA B00   QAAAAAAAAAAAAAAAAAAAA  AAAAAAAAAAB AA
code  --0R9QAAAAAAAAAAAAAAAAAAAAAAAB001QHQAAAAAAAAAAAAAAAAAAAA  AAAAAAAAAAB0AA--
1l6l  KEPCVSLVSQYFQTVTDYGKDLMEKVKSPELQAEAKSYFEKSKEQLTPLIKKAGTE  LVNFLSYFVELGTQPA
site 


*RATIO :  lcs/trimmed_seq_a = 0.896 (=   60/   67), lcs/trimmed_seq_b = 0.882 (=   60/   68)
Structural alignment by ComSubstruct + manual inspection
DSSP lllLLHHHHLLHHHHHHHHHHHHHHLLLLLLLHHHHHHHLLLLHHHHHHLHHHHHHHHHHHHHHHHHLLLL....
2ou1 epcVSLVSQYQTVTDYGKDLMEKVKSPELQAEAKSYFEKSKEQLTPLIKKAGTELVNFLSYFVELGTQPAT....
                           |               ||
1l6l ...KEPCVSLVSQYFQTVTDYGKDLMEKVKSPELQAEAKSYFEKSKEQLTPLIKKAGTELVNFLSYFVELGtqpa 
DSSP ...LLLLLLHHHHHHHHHHHHHHHHHHHHHHHHLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhlll

*Z-score 4.3  AR 68  RMSD 7.1A  SI 4%
Structural alignment by DaliLite

(1-4)
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   Z-Score: 3.8
AR: 67
RMSD: 5.4A
SI: 27%
1l6l F (len 75) 1l6l 2 (len 73)
DaliLite result

site 
1l6F AKEPCVSLVSQYFQTVTDYGKDLMEKVKS  PELQAEAKSYFEKSKEQ LTPLIKKAGTELVNFLSYFVELGTQPATQ
code --000PQAAAAAAAAAAAAAAAAAAAAAA  AAB00001AAAAAAAAA AAAAAAAAAB0QAAAAAAAAAB1QBG0--

LCS      0P AAAAAAAAAAAAAAAAAAAA    AA 0    AAAAAAAAA AAAAAAAAA  QAAAAAAAA     G0
code   --0P AAAAAAAAAAAAAAAAAAAAHB1QAAG0QBQ AAAAAAAAA1AAAAAAAAAH QAAAAAAAAG    G00000--
1l62   EPCV SLVSQYFQTVTDYGKDLMEKVKSPELQAEAK SYFEKSKEQLTPLIKKAGTE LVNFLSYFVE    LGTQPATQ
site 


*RATIO :  lcs/trimmed_seq_a = 0.761 (=   54/   71), lcs/trimmed_seq_b = 0.783 (=   54/   69)
Structural alignment by ComSubstruct + manual inspection
DSSP llLLLLLHHHHHHHHHHhHHHHHHHHHHHHHLLLlllhHHHHHHHHHHHHHHHHHHLHhHHHHHHHHLLLLLLLL......
1l6F akEPCVSLVSQYFQTVTdYGKDLMEKVKSPELQAeaksYFEKSKEQLTPLIKKAGTELvNFLSYFVELGTQPATQ......
       |||||||||||||||                        ||                        |
1l62 ..EPCVSLVSQYFQTVT.DYGKDLMEKVKSPELQ....AEAKSYFEKSKEQLTPLIKK.AGTELVNFLSYFVELGtqpatq 
DSSP ..LLLLLLHHHHHHHHH.HHHHHHHHLLLLHHHH....LLLHHHHHHHHHHHHHHHHH.LHHHHHHHHHHHLLLLllllll

*Z-score 3.8  AR 67  RMSD 5.4A  SI 27%
Structural alignment by DaliLite


(2) Cluster 33

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   Z-Score: 3.7
AR: 71
RMSD: 6.0A
SI: 51%
1l6l D (len 74) 1l6l K (len 74)
DaliLite result

site 
1l6D AKEPCVESLVSQYFQTVTDYGKDLMEKVKSPE   LQA KSYFEKSKEQLTPLIKKAGTELVNFLSYFVELGTQPATQ
code --1QB1QAAAAAAAAAAAAAAAAAAAAAAAAB   0PI QAAAAAAAAAAAAAAAAAABGQAAAAAAAABG001R0--

LCS        QAAAAAAAAAAAAAAAAAAAAAA  B   0   Q AAAAAAAAAAAAAAAAABGQAAAAAAAA  00 R0
code  --000QAAAAAAAAAAAAAAAAAAAAAA  BH3000O2Q AAAAAAAAAAAAAAAAABGQAAAAAAAA0R000R0--
1l6K  AKEPCVESLVSQYFQTVTDYGKDLMEKV  KSPELQAKS YFEKSKEQLTPLIKKAGTELVNFLSYFVELGTQPATQ
site


*RATIO :  lcs/trimmed_seq_a = 0.829 (=   58/   70), lcs/trimmed_seq_b = 0.829 (=   58/   70)
Structural alignment by ComSubstruct + manual inspection
DSSP .LLLHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLhHHHHHHHHHHHHHHHHHHLLHHHHHHHHHLLLLLLLll
1hbq .AKEPCVESLVSQYFQTVTDYGKDLMEKVKSPELQAkSYFEKSKEQLTPLIKKAGTELVNFLSYFVELGTQPAtq
                                          ||||||||||||||||||||||||||||||||||||
1avg aKEPCVESLVSQYFQTVTDYGKDLMEKVKSPELQAK.SYFEKSKEQLTPLIKKAGTELVNFLSYFVELGTQPAtq
DSSP lLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLL.HHHHHHHHHHHHHHHHHHHLHHHHHHHHHHLLLLLLll


*Z-score 3.7  AR 71  RMSD 6.0A  SI 51%
Structural alignment by DaliLite


(3) Cluster 34

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   Z-Score: 28.7
AR: 258
RMSD: 0.9A
SI: 98%
1l9b M (len 267) 1rg5 M (len 302)
DaliLite result

site                                                      +++++++++++++++++++++++++++                                **************
1l9b                         FST      
LLGWFGNAQLGPI    YLGSLGVLSLFSGLMWFFTIGIWFWYQAGWNPAVFLRDLFFFSL EPPAPEYGLSFAAPLKEGGLWLIASFFMFV
code                         --A      
AAAAAAB0000RG    000QAAAAAAAAAAAAAAAAAAAAAAABRR0QAAAAABQABG0R 0000QAB0RGRR00QAG1QAAAAAAAAAAA
LCS                            A          AAAB000 RG    000QAAAAAAAAAAAAAAAAAAAAAAABRR0QAAAAABQA G0  0000QAB0R RR00Q G1QAAAAAAAAAAA
code --00RR00R00000000R0000R0RQABG0000000QAAAB000 RG00O0000QAAAAAAAAAAAAAAAAAAAAAAABRR0QAAAAABQAJG0 00000QAB0R0RR00QBG1QAAAAAAAAAAA
1rg5 AEYQNIFSQVQVRGPADLGMTEDVNLANRSGVGPFSTLLGWFGN AQLGPIYLGSLGVLSLFSGLMWFFTIGIWFWYQAGWNPAVFLRDLFFFS LEPPAPEYGLSFAAPLKEGGLWLIASFFMFV
site                                                      +++++++++++++++++++++++++++                                **************

site ***************  **************************              *            ++******************
1l9b AVWSWWGRTYLRAQALGMGKHTAWAFLSAIWLWMVLGFIRPILMGSWSEAVPYGIFSHLDWTNNFSLVHGNLFYNPFHGLSIAFLYGSAL
code AAAAAAAAAAAAAAABR00RQAAAAAAAAAAAAAAB00QAAAAB0GQABG000GQQAAAAAAAAAAAABO0QABGQAAAAAAAAAAAAAA

LCS  AAAAAAAAAAAAAAABR00RQAAAAAAAAAAAAAAB00QAAAAB GQABG000G QAAAAAAAAAAAAB 0QABGQAAAAAAAAAAAAAA
code AAAAAAAAAAAAAAABR00RQAAAAAAAAAAAAAAB00QAAAABRGQABG000GOQAAAAAAAAAAAABR0QABGQAAAAAAAAAAAAAA
1rg5 AVWSWWGRTYLRAQALGMGKHTAWAFLSAIWLWMVLGFIRPILMGSWSEAVPYGIFSHLDWTNNFSLVHGNLFYNPFHGLSIAFLYGSAL
site ***************  **************************              *            ++******************

site ***********        *                 *      ***************************
1l9b LFAMHGATILAVSRFGGERELEQIADRGTAAERAALFWRWTMGFNATMEGIHRWAIWMAVLVTLTGGIGILLSGTVVDNWYVWGQNH
code AAAAAAAAAAABQABRQABQAAAAB000QAAAAAAAAAAAG3RG000QAAAAAAAAAAHAAAAAAAAAAAABGQB00R0QAAAAA--

LCS  AAAAAAAAAAABQABRQABQAAAAB000QAAAAAAAAAAAG   000QAAAAAAAAAA AAAAAAAAAAAABGQB00R0QAAAAA
code AAAAAAAAAAABQABRQABQAAAAB000QAAAAAAAAAAAG000000QAAAAAAAAAAAAAAAAAAAAAAABGQB00R0QAAAAAB--
1rg5 LFAMHGATILAVSRFGGERELEQIADRGTAAERAALFWRWTMGFNATMEGIHRWAIWMAVLVTLTGGIGILLSGTVVDNWYVWGQNHG
site ***********        *                 *      ***************************


*RATIO :  lcs/trimmed_seq_a = 0.943 (=  248/  263), lcs/trimmed_seq_b = 0.832 (=  248/  298)
Structural alignment by ComSubstruct + manual inspection
DSSP .................lhhhhhhhhLLEEL.................LEELHHHHHHHHHHHHHHHHHHHHHHHHHLLLLHHHHHHLHHHLLLLLLLHHHLLLLLLLHHHLHHHHHHHHHHHH
1l9b .................fstllgwfgNAQLG.................PIYLGSLGVLSLFSGLMWFFTIGIWFWYQAGWNPAVFLRDLFFFSLEPPAPEYGLSFAAPLKEGGLWLIASFFMFV
                                   |                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
1rg5 aeyqnifsqvqvrgpadlgmtedvnlANRSGvgpfstllgwfgnaqlgPIYLGSLGVLSLFSGLMWFFTIGIWFWYQAGWNPAVFLRDLFFFSLEPPAPEYGLSFAAPLKEGGLWLIASFFMFV
DSSP lllllllllllllllllllllllllhHHLLLlllllhhhhllllllllLLLLLHHHHHHHHHHHHHHHHHHHHHHHHLLLLHHHHHHLLLLLLLLLLLHHHLLLLLLLHHHLHHHHHHHHHHHH


DSSP HHHHHHHHHHHHHHHLLLLLHHHHHHHHHHHHHHHHHLHHHHHHLLHHHLLLLLLLHHHHHHHHHHHHLLLHHHLHHHHHHHHHHHHHHH
1l9b AVWSWWGRTYLRAQALGMGKHTAWAFLSAIWLWMVLGFIRPILMGSWSEAVPYGIFSHLDWTNNFSLVHGNLFYNPFHGLSIAFLYGSAL
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
1rg5 AVWSWWGRTYLRAQALGMGKHTAWAFLSAIWLWMVLGFIRPILMGSWSEAVPYGIFSHLDWTNNFSLVHGNLFYNPFHGLSIAFLYGSAL
DSSP HHHHHHHHHHHHHHHLLLLLHHHHHHHHHHHHHHHHHLHHHHHHLLHHHLLLLLHHHHHHHHHHHHHHLLLHHHLHHHHHHHHHHHHHHH


DSSP HHHHHHHHHHHLHHHLLLLHHHHHHLLLHHHHHHHHHHHHHHLLLLLLLLHHHHHHHHHHHHHHHHHHHHHLLLLLLLLHHHHHHHL.
1l9b LFAMHGATILAVSRFGGERELEQIADRGTAAERAALFWRWTMGFNATMEGIHRWAIWMAVLVTLTGGIGILLSGTVVDNWYVWGQNH.
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
1rg5 LFAMHGATILAVSRFGGERELEQIADRGTAAERAALFWRWTMGFNATMEGIHRWAIWMAVLVTLTGGIGILLSGTVVDNWYVWGQNHg
DSSP HHHHHHHHHHHLHHHLLLLHHHHHHLLLHHHHHHHHHHHHHHLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLHHHHHHHLl


*Z-score 28.7  AR 258  RMSD 0.9A  SI 98%
Structural alignment by DaliLite


(4) Cluster 35

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   Z-Score: 13.0
AR: 86
RMSD: 1.9A
SI: 100%
1lya A (len 97) 1lyw A (len 95)
DaliLite result

site                              +++*++++++++
1lya  GPIPEVLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHC KLLDIACWIHHKYNSDKSSTYVKNGTSFDIHYGS GSLSGYLSQDTVSVPCQ
code  --00000000RRG0000000003O0000000R0QB00G00000QB0 0QBBQAAABG0000QABGQB0000R0000000R0 00000000000000O--

LCS        0  00 RG  0000000 O0000000R0QB00G00000QB0 0   QAA  G0000QABGQB0000R 0000  R  00000000000000O
code --QABG0QB00 RG  00000002O0000000R0QB00G00000QB0R0R0 QAAGRG0000QABGQB0000RR0000R RQB00000000000000O--
1lyw IPEVLKNYMDA QY  YGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLD IACWIHHKYNSDKSSTYVKNGTSFDIH YGSGSLSGYLSQDTVSVPCQ
site                              +++*++++++++


*RATIO :  lcs/trimmed_seq_a = 0.806 (=   75/   93), lcs/trimmed_seq_b = 0.824 (=   75/   91)
Structural alignment by ComSubstruct + manual inspection
DSSP llllllleeelLLEEEEEEEELLLLEEEEELLLLLLLLLLLLLLLLLLLLHHHHLLLLLLHHHLLLLEEEEEEEEEELLLLEEEEEEEELLEELLLL
1lya gpipevlknymDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSDKSSTYVKNGTSFDIHYGSGSLSGYLSQDTVSVPCQ
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
1lyw ..ipevlknymDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSDKSSTYVKNGTSFDIHYGSGSLSGYLSQDTVSVPCQ
DSSP ..lllllllllLLLLEEEEEELLLLEEEEEELLLLLLLLLLLLLLLLLLLHHHHHLLLLLLLLLLLLLLLLLEEEELLLLLLEEEELLLLLEELLLL


*Z-score 13.0  AR 86  RMSD 1.9A  SI 100%
Structural alignment by DaliLite



[The DSSP code]

[The 5-tile code]