Z-Score:
17.0
AR: 116 RMSD: 8.9A SI: 100% |
||||
1m46 A (len 148) | 1n2d
A (len 147) |
DaliLite result |
site
************ 1m46 SATRANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTEDFVKAFQ code --QAAAAAAAAAABQBRRRG00QABQAAAAAAB00000QAAAAAAAABGQABRB0R000QAAAAAAAAABQAAAAAAB000QAAHQAAIA LCS AAAAAAAAAABQBRRRG00QABQAAAAAAB00000QAAAAAAAABGQA B R000QAAAAAAAAABQAAAAAAB 00QAA QAA A code --AAAAAAAAAABQBRRRG00QABQAAAAAAB00000QAAAAAAAABGQAAABGR000QAAAAAAAAABQAAAAAABG00QAA1QAAAA 1n2d ATRANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTEDFVKAFQ site ************ site ************ ************ 1m46 VFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVLRQ code AABQBRRRG00QAAAAAAAA000R000QAAAAAAAABG000QBR00RQAAAAAAAB-- LCS AA QBRRRG00QAAAAAAA 000R000QAAAAAAAABG000QBR00RQAAAAAAAB code AAGQBRRRG00QAAAAAAA0000R000QAAAAAAAABG000QBR00RQAAAAAAAB-- 1n2d VFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVLRQ site ************ ************ *RATIO : lcs/trimmed_seq_a = 0.938 (= 135/ 144), lcs/trimmed_seq_b = 0.944 (= 135/ 143) |
Structural alignment by ComSubstruct + manual inspection |
DSSP
lLHHHHHHHHHHHLLLLLLEEEHHHHHHHHHHLLLLLLHHHHHHHHHLLHHHHLLLEEEHHHHHHHHHHLHHHHHHLLLLLHHHHHHHHH 1m46 sATRANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTEDFVKAFQ ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 1n2d .ATRANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTEDFVKAFQ DSSP .LHHHHHHHHHHHLLLLLLEEEHHHHHHHHHHLLLLLLHHHHHHHHHHLHHHHHLLEEEHHHHHHHHHHLHHHHHHHHLLLLHHHHHHHH DSSP LLLLLLLLEEEHHhhhhhhhhllllllhhhhhhhhllllLLLLLEEEHHHHHHhhhll 1m46 VFDKESTGKVSVGdlrymltglgekltdaevdellkgveVDSNGEIDYKKFIEdvlrq ||||||||||||| |||||||||||||| 1n2d VFDKESTGKVSVGdlrymltglgekltdaevdellkgveVDSNGEIDYKKFIEdvlrq DSSP LLLLLLLLEEEHHhhhhhhhhllllllhhhhhhhhhlllLLLLLEEEHHHHHHhhhll *Z-score 17.0 AR 116 RMSD 8.9A SI 100% |
Structural alignment by DaliLite |
Z-Score:
15.4
AR: 118 RMSD: 10.1A SI: 100% |
||||
1m46 A (len 148) | 1n2d
B (len 145) |
DaliLite result |
site
************ 1m46 SATRANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDAT TKAKTEDFVKAFQ code --QAAAAAAAAAABQBRRRG00QABQAAAAAAB00000QAAAAAAAABGQABRB0R000QAAAAAAAAABQAAAAAA B000QAAHQAAIA LCS Q AAAAAABQBRRRG00QABQAAAAAAB00000QAAAAAAAABGQABRB0R000QAAAAAAAAABQAAAAAA B 0 QAA AA A code --0Q AAAAAABQBRRRG00QABQAAAAAAB00000QAAAAAAAABGQABRB0R000QAAAAAAAAABQAAAAAAHBG0 QAA AA A 1n2d RANK DIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAK TED FV K site ************ site * *********** ********* *** 1m46 VF D KESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGV EVD SNGEIDYKKFIEDVLRQ code AA B QBRRRG00QAAAAAAAA000R000QAAAAAAAABG 000 QBR00RQAAAAAAAB-- LCS AA B QBRRRG00QAAAAAA 000R000QAAAAAA BG 000 QBR00RQAAAAAA B code AAAABGQBRRRG00QAAAAAAB2000R000QAAAAAA BGR0000QBR00RQAAAAAA B1-- 1n2d AFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDEL LKGVEVDSNGEIDYKKFIED VLRQ site ************ ***** ******* *RATIO : lcs/trimmed_seq_a = 0.903 (= 130/ 144), lcs/trimmed_seq_b = 0.922 (= 130/ 141) |
Structural alignment by ComSubstruct + manual inspection |
DSSP
llhhhHHHHHHHHLLLLLLEEEHHHHHHHHHHLLLLLLHHHHHHHHHLLHHHHLLLEEEHHHHHHHHHHLHHHHHHLLLLLHHHHHHHHH 1m46 satraNKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTEDFVKAFQ ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 1n2d ...raNKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTEDFVKAFQ DSSP ...llLHHHHHHHLLLLLLLEEHHHHHHHHHHLLLLLLHHHHHHHHHLLHHHLLLLEELHHHHHHHHHHLHHHHHHHHHLLHHHHHHHHH DSSP LLLLLLLLEEEHHHhhhhhhhllllllhhhhhhhhLLLLLLLLLEEEHHHHHHHhhll 1m46 VFDKESTGKVSVGDlrymltglgekltdaevdellKGVEVDSNGEIDYKKFIEDvlrq |||||||||||||| ||||||||||||||||||| 1n2d VFDKESTGKVSVGDlrymltglgekltdaevdellKGVEVDSNGEIDYKKFIEDvlrq DSSP HHLLLLLLEEEHHHhhhhhhhllllllhhhhhhhlLLLLLLLLLEEEHHHHHHHhhll *Z-score 15.4 AR 118 RMSD 10.1A SI 100% |
Structural alignment by DaliLite |
Z-Score:
28.6
AR: 186 RMSD: 1.2A SI: 100% |
||||
1m7g C (len 209) | 1m7h
C (len 204) |
DaliLite result |
site
******** 1m7g STNITFHASA LT RSERTELRNQ RGLTIWLTGLSASGKSTLAVELEHQLVRDR RVHAYRLDGDNIRFGLNKDLGFSEADRNENIRRIAEVA code --000QABGR 00 QAAAAAAABR 00000000000RR0QAAAAAAAAAAAAB00 R0000000QAB1QB0QBQBG000QAAAAAAAAAAAAAA LCS 0 R 00 QAAAAAA BR 00000000000RR0QAAAAAAAAAAAA 00 R0000000QAB1QB0QBQBG0 0QAAAAAAAAAAAAAA code --0 RG000QAAAAAA BRG00000000000RR0QAAAAAAAAAAAA 00BR0000000QAB1QB0QBQBG0R0QAAAAAAAAAAAAAA 1m7h TFH ASALTRSERTEL RNQRGLTIWLTGLSASGKSTLAVELEHQLV RDRRVHAYRLDGDNIRFGLNKDLGFSEADRNENIRRIAEVA site ******** site * 1m7g KLFADSNSIAITSFISPYRKDRDTARQLHEVATPG EETGLPFVEVYVDVPVEVAEQRDPKGLYKKAREGVIKEFTGISAPYEAPANPEVH code AAAAABR0000000RRRGQAAAAAAAAAABGR00R GR000000000R000QAAAAABGQBRQAAAAABRRG0R00QG0000000R00R00 LCS AAAAABR0000000RRRGQAAAAAAAAAABG 00 GR 00000000R000QAAAAAB QBRQAAAAABRRG0R00 G 000000R00R00 code AAAAABR0000000RRRGQAAAAAAAAAABG 0030GRG00000000R000QAAAAABRQBRQAAAAABRRG0R00RGR000000R00R00 1m7h KLFADSNSIAITSFISPYRKDRDTARQLHEV ATPGEETGLPFVEVYVDVPVEVAEQRDPKGLYKKAREGVIKEFTGISAPYEAPANPEVH site * site 1m7g VKNYELPVQDAVKQIIDYLDTKGYLPAKK code 0R0GRG0QAAAAAAAAAAAAABRRG00-- LCS 0R GRG0QAAAAAAAAAAAAABRRG0 code 0RRGRG0QAAAAAAAAAAAAABRRG0-- 1m7h VKNYELPVQDAVKQIIDYLDTKGYLPAK site *RATIO : lcs/trimmed_seq_a = 0.917 (= 188/ 205), lcs/trimmed_seq_b = 0.940 (= 188/ 200) |
Structural alignment by ComSubstruct + manual inspection |
DSSP
llllllllllllhhhhhhhhllLLEEEEEELLLLLLHHHHHHHHHHHHHHHHLLLEEEELHHHHLLLLLLLLLLLHHHHHHHHHHHHHHH 1m7g stnitfhasaltrsertelrnqRGLTIWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDNIRFGLNKDLGFSEADRNENIRRIAEVA |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 1m7h ....tfhasaltrsertelrnqRGLTIWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDNIRFGLNKDLGFSEADRNENIRRIAEVA DSSP ....llllllllhhhhhhhhllLLEEEEEELLLLLLHHHHHHHHHHHHHLLLLLLEEEEEHHHHLLLLLLLLLLLHHHHHHHHHHHHHHH DSSP HHHHHLLLEEEEELLLLLHHHHHHHHHHHHLLLLLLLLLLLEEEEEEELLHHHHHLLLLLLHHHHHHLLLLLLLLLLLLLLLLLLLLLEE 1m7g KLFADSNSIAITSFISPYRKDRDTARQLHEVATPGEETGLPFVEVYVDVPVEVAEQRDPKGLYKKAREGVIKEFTGISAPYEAPANPEVH |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 1m7h KLFADSNSIAITSFISPYRKDRDTARQLHEVATPGEETGLPFVEVYVDVPVEVAEQRDPKGLYKKAREGVIKEFTGISAPYEAPANPEVH DSSP HHHHHLLLEEEEELLLLLHHHHHHHHHHHHLLLLLLLLLLLEEEEEEELLHHHHHHHLLLLHHHHHHHLLLLLLLLLLLLLLLLLLLLEE DSSP EELLLLLHHHHHHHHHHHHHHLLLLLLLl 1m7g VKNYELPVQDAVKQIIDYLDTKGYLPAKk |||||||||||||||||||||||||||| 1m7h VKNYELPVQDAVKQIIDYLDTKGYLPAK. DSSP EELLLLLHHHHHHHHHHHHHHLLLLLLL. *Z-score 28.6 AR 186 RMSD 1.2A SI 100% |
Structural alignment by DaliLite |
Z-Score:
4.8
AR: 60 RMSD: 2.2A SI: 95% |
||||
1mi7 R (len 103) | 1p6z
R (len 102) |
DaliLite result |
site 1mi7 QQSPYSAAMAEQRHQEWLRFVDLLKNAYQNDLHLPLLNLMLTPDEREALGTRVRIVEELLRGEMSQRELKNELGAGIATITRGSNSLKAAPVELRQWLEEVLL code --0QIAAAAAAAAAAAAAAAAAAAAAAAAGRRQAAAAAAB00QAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAABG0QAAAAAAAAA-- LCS 0Q AAAAAAAAAAAAAAAAAAAAAA RRQAAAAAAB 0QAAAAAAAAAAAAAAAAA AAAA AAAAAAAAAAABG0QAAAAAAAAA code --R00Q AAAAAAAAAAAAAAAAAAAAAABRRQAAAAAABG0QAAAAAAAAAAAAAAAAABRGG0QAAAAB0RR00QAAAAAAAAAAABG0QAAAAAAAAA-- 1p6z QSPYSA AMAEQRHQEWLRFVDLLKNAYQNDLHLPLLNLMLTPDEREALGTRVRIVEELLRGEMSQRELKNELGAGIATITRGSNSLKAAPVELRQWLEEVLL site *RATIO : lcs/trimmed_seq_a = 0.818 (= 81/ 99), lcs/trimmed_seq_b = 0.827 (= 81/ 98) |
Structural alignment by ComSubstruct + manual inspection |
DSSP
LLLHhHHHHHHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHLLHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhhhllhhhhhhhhhhhl 1mi7 QQSPySAAMAEQRHQEWLRFVDLLKNAYQNDLHLPLLNLMLTPDEREALGTRVRIVEELLRgemsqrelknelgagiatitrgsnslkaapvelrqwleevll | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| 1p6z QSPY.SAAMAEQRHQEWLRFVDLLKNAYQNDLHLPLLNLMLTPDEREALGTRVRIVEELLRgemsqrelknelgagiatitrgsnslkaapvelrqwleevll DSSP LLLL.LHHHHHHHHHHHHHHHHHHHHHHHHLLHHHHHHHHLLHHHHHHHHHHHHHHHHHHHllllhhhhhhhhlllhhhhhhhhhhhhhllhhhhhhhhhhhl *Z-score 4.8 AR 60 RMSD 2.2A SI 95% |
Structural alignment by DaliLite |
Z-Score:
4.6
AR: 61 RMSD: 2.7A SI: 95% |
||||
1mi7 R (len 103) | 1wrp
R (len 102) |
DaliLite result |
site
1mi7 QQSPYSAAMAEQRHQEWLRFVDLLKNAYQNDLHLPLLNLMLTPDEREALGTRVRIVEELLRGEMSQRELKNELGAGIATITRGSNSLKAAPVELRQWLEEVLL code --0QIAAAAAAAAAAAAAAAAAAAAAAAAGRRQAAAAAAB00QAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAABG0QAAAAAAAAA-- LCS 0Q AAAAAAAAAAAAAAAAAAAAA RRQAAAAAAB 0QAAAAAAAAAAAAAAAAA AAAAA AAAAAA AAAABG0QAAAAAAA code --RG00Q AAAAAAAAAAAAAAAAAAAAAB RRQAAAAAABG0QAAAAAAAAAAAAAAAAABRGG0QAAAAA0RR00QAAAAAAHAAAABG0QAAAAAAAB0-- 1wrp QSPYSAA MAEQRHQEWLRFVDLLKNAYQN DLHLPLLNLMLTPDEREALGTRVRIVEELLRGEMSQRELKNELGAGIATITRGSNSLKAAPVELRQWLEEVLL site *RATIO : lcs/trimmed_seq_a = 0.788 (= 78/ 99), lcs/trimmed_seq_b = 0.796 (= 78/ 98) |
Structural alignment by ComSubstruct + manual inspection |
DSSP
lllhHHHHHHHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHLLHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhllhhhhhhhhhhhl 1mi7 qqspYSAAMAEQRHQEWLRFVDLLKNAYQNDLHLPLLNLMLTPDEREALGTRVRIVEELLRGEMSqrelknelgagiatitrgsnslkaapvelrqwleevll ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 1wrp .qspYSAAMAEQRHQEWLRFVDLLKNAYQNDLHLPLLNLMLTPDEREALGTRVRIVEELLRGEMSqrelknelgagiatitrgsnslkaapvelrqwleevll DSSP .lllLLLLHHHHHHHHHHHHHHHHHHHHHLLLHHHHHHHHLLHHHHHHHHHHHHHHHHHHHLLLLhhhhhhhhlllhhhhhhhhhhhhlllhhhhhhhhhhll *Z-score 4.6 AR 61 RMSD 2.7A SI 100% |
Structural alignment by DaliLite |
Z-Score:
3.2
AR: 60 RMSD: 3.5A SI: 60% |
||||
1mi7 R (len 103) | 2oz9
R (len 104) |
DaliLite result |
site 1mi7 QQSPYSAAMAEQRHQEWLRFVDLLKNAYQNDLHLPLLNLMLTPDEREALGTRVRIVEELLRGEMSQRELKNELGAGIATITRGSNSLKAAPVELRQWLEEVLL code --0QIAAAAAAAAAAAAAAAAAAAAAAAAGRRQAAAAAAB00QAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAABG0QAAAAAAAAA-- LCS 0Q AAAAAAAAAAAAAAAAAAAAAA RRQAAAAAA 00QAAAAAAAAAAAAAAAAA AAAAA AAAAAAAAAAABG0QAAAAAAAA code --00Q AAAAAAAAAAAAAAAAAAAAAAB RRQAAAAAAG00QAAAAAAAAAAAAAAAAABRRG0QAAAAAG0R00QAAAAAAAAAAABG0QAAAAAAAA0BG0-- 2oz9 SPYSA AMAEQRHQEWLRFVDLLKNAYQN DLHLPLLNLMLTPDEREALGTRVRIVEELLRGEMSQRELKNELGAGIATITRGSNSLKAAPVELRQWLEEVLLKSD site *RATIO : lcs/trimmed_seq_a = 0.818 (= 81/ 99), lcs/trimmed_seq_b = 0.810 (= 81/ 100) |
Structural alignment by ComSubstruct + manual inspection |
DSSP lLLHHhHHHHHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHL...LHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhhllhhhhhhhhhhhl 1mi7 qQSPYsAAMAEQRHQEWLRFVDLLKNAYQNDLHLPLLNLML...TPDEREALGTRVRIVEELLRGemsqrelknelgagiatitrgsnslkaapvelrqwleevll ||||||||||||||||||||||||||||||||||| | 2oz9 .SPYS.AAMAEQRHQEWLRFVDLLKNAYQNDLHLPLLNLMLtpdEREALGTRVRIVEELLRGEMSqrelknelgagiatitrgsnslkaapvelrqwleevllksd DSSP .LLLL.HHHHHHHHHHHHHHHHHHHHHHHLLLHHHHHHHHLlhhHHHHHHHHHHHHHHHHHLLLLhhhhhhhhlllhhhhhhhhhhhhhllhhhhhhhhhhhllll *Z-score 3.2 AR 60 RMSD 3.5A SI 60% |
Structural alignment by DaliLite |
Z-Score:
4.5
AR: 60 RMSD: 2.7A SI: 100% |
||||
1mi7 R (len 103) | 3wrp
(len 101) |
DaliLite result |
site 1mi7 QQSPYSAAMAEQRHQEWLRFVDLLKNAYQNDLHLPLLNLMLTPDEREALGTRVRIVEELLRGEMSQRELKNELGAGIATITRGSNSLKAAPVELRQWLEEVLL code --0QIAAAAAAAAAAAAAAAAAAAAAAAAGRRQAAAAAAB00QAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAABG0QAAAAAAAAA-- LCS A AAAAAAAAAAAAAAAAAAA RRQAAAAAA 00QAAAAAAAAAAAAAAAAA AAAAAA AAAAAAAAAAABG0QAAAAAAA code --ABQAAAAAAAAAAAAAAAAAAAB RRQAAAAAA000QAAAAAAAAAAAAAAAAABRRG0QAAAAAABR00QAAAAAAAAAAABG0QAAAAAAAB0B1B-- 3wrp SAAMAEQRHQEWLRFVDLLKNAYQN DLHLPLLNLMLTPDEREALGTRVRIVEELLRGEMSQRELKNELGAGIATITRGSNSLKAAPVELRQWLEEVLLKSD site *RATIO : lcs/trimmed_seq_a = 0.778 (= 77/ 99), lcs/trimmed_seq_b = 0.794 (= 77/ 97) |
Structural alignment by ComSubstruct + manual inspection |
DSSP
lllhhHHHHHHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHLLHHHHHHHHHHHHHHHHHHHHHHH...hhhhhhhhhhhhhhhhhhhhhhhhllhhhhhhhhhhhl 1mi7 qqspySAAMAEQRHQEWLRFVDLLKNAYQNDLHLPLLNLMLTPDEREALGTRVRIVEELLRGEMS...qrelknelgagiatitrgsnslkaapvelrqwleevll |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 3wrp .....SAAMAEQRHQEWLRFVDLLKNAYQNDLHLPLLNLMLTPDEREALGTRVRIVEELLRGEMSqrelknelgagiatitrgsnslkaapvelrqwleevllksd DSSP .....LLLLHHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHLLHHHHHHHHHHHHHHHHHHHLLLLhhhhhhhhlllhhhhhhhhhhhhlllhhhhhhhhhhhllll *Z-score 4.5 AR 60 RMSD 2.7A SI 100% |
Structural alignment by DaliLite |
Z-Score:
33.1
AR: 178 RMSD: 10.3A SI: 100% |
||||
1mkm A (len 246) | 1mkm
B (len 247) |
DaliLite result |
site 1mkA MNTLKKAFEILDFIVKNPGDVSVSEIAEKFNMSVSNAYKYMVVLEEKGFVLRKKDKRYVPGYKLIEYGSFVLRRFNI RDIAHDHLVDIMK code --QAAAAAAAAAAAABGR0000QAAAAAAB000QAAAAAAAAAAAABRRG000QBR00000QAAAAAAAAAAAB00Q AAB1QAAAAAAAA LCS QAAAAAAAAAAAABG 0000QAAAAAAB 0QAAAAAAAAAAAABRR 000QBR00000QAAAAAAAAAAAB Q AAB1QAAAAAAAA code --BQAAAAAAAAAAAABG00000QAAAAAABRG0QAAAAAAAAAAAABRR0000QBR00000QAAAAAAAAAAABG QAAAB1QAAAAAAAA 1mkB HMNTLKKAFEILDFIVKNPGDVSVSEIAEKFNMSVSNAYKYMVVLEEKGFVLRKKDKRYVPGYKLIEYGSFVLRRF NIRDIAHDHLVDIMK site site 1mkA RTGETVHLILKDGFEGVYIDKVEGEQSIPMVS RLGMKVDLYSTASGKSILAFVPEKELKEYLKIVELKP KTPNTITNPRVLKRELEKIRK code B0RG000000000RG003R00000QBG000RG 00R0000QABGQAAAAAAA000QAAAAAAAB000R0R R0QB00RGQAAAAAAAAAAAA LCS B0RG000000000RG00 R00000 000RG 00R0000 GQAAAAAA 000QAAAAAAAB000 0R R0QB00RGQAAAAAAAAAAAA code B0RG000000000RG000R00000R 000RG0000R0000RHRGQAAAAAAB000QAAAAAAAB000 0R0R0QB00RGQAAAAAAAAAAAA 1mkB RTGETVHLILKDGFEGVYIDKVEGE QSIPMVSRLGMKVDLYSTASGKSILAFVPEKELKEYLKIVE LKPKTPNTITNPRVLKRELEKIRK site site 1mkA RGYAVDNEENEIGIMCVGVPIFDHNGYPVAGVSISGVARKFTEEKIEEYSDVLKEKAEEISRKLGY code BR0000RRQB00RG000000000QBR0RR00000000QABG0QAAAAAAAAAAAAAAAAAAAAB-- LCS BR 000RR 00RG000000000QBR0RR00000000QABG0QAAAAAAAAAAAAAAAAAAAAB code BRG000RRR000RG000000000QBR0RR00000000QABG0QAAAAAAAAAAAAAAAAAAAAB-- 1mkB RGYAVDNEENEIGIMCVGVPIFDHNGYPVAGVSISGVARKFTEEKIEEYSDVLKEKAEEISRKLGY site *RATIO : lcs/trimmed_seq_a = 0.926 (= 224/ 242), lcs/trimmed_seq_b = 0.922 (= 224/ 243) |
Structural alignment by ComSubstruct + manual inspection |
DSSP
.lllhhhhhhhhhhhhhllllllhhhhhhhlllLHHHhhhhhhhhhhllleeellllleeellhhhhhhhhhhHHLLHHHHHHHHHHHHHH 1mkA .mntlkkafeildfivknpgdvsvseiaekfnmSVSNaykymvvleekgfvlrkkdkryvpgyklieygsfvlRRFNIRDIAHDHLVDIMK |||| |||||||||||||||||| 1mkB hmntlkkafeildfivknpgdvsvseiaekfnmSVSNaykymvvleekgfvlrkkdkryvpgyklieygsfvlRRFNIRDIAHDHLVDIMK DSSP lllhhhhhhhhhhhhhhllllllhhhhhhhlllLHHHhhhhhhhhhhhlleeellllleeellhhhhhhhhhhLLLHHHHHHHHHHHHHHH DSSP LLLLLEEEEEELLLEEEEEEEELLLLLLLLLLLLLLEEELLLLHHHHHHHHHLLHHHHHHHHHHLLLLLLLLLLLLLHHHHHHHHHHHHH 1mkA RTGETVHLILKDGFEGVYIDKVEGEQSIPMVSRLGMKVDLYSTASGKSILAFVPEKELKEYLKIVELKPKTPNTITNPRVLKRELEKIRK |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 1mkB RTGETVHLILKDGFEGVYIDKVEGEQSIPMVSRLGMKVDLYSTASGKSILAFVPEKELKEYLKIVELKPKTPNTITNPRVLKRELEKIRK DSSP LLLLEEEEEEEELLEEEEEEEELLLLLLLLLLLLLLEEELLLLHHHHHHHLLLLHHHHHHHHHHLLLLLLLLLLLLLHHHHHHHHHHHHH DSSP HLLEEEELLLLLLEEEEEEEEELLLLLEEEEEEEEEEHHHLLHHHHHHHHHHHHHHHHHHHHHLLL 1mkA RGYAVDNEENEIGIMCVGVPIFDHNGYPVAGVSISGVARKFTEEKIEEYSDVLKEKAEEISRKLGY |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 1mkB RGYAVDNEENEIGIMCVGVPIFDHNGYPVAGVSISGVARKFTEEKIEEYSDVLKEKAEEISRKLGY DSSP HLLEEEELLLLLLEEEEEEEEELLLLLEEEEEEEEEEHHHLLHHHHHHHHHHHHHHHHHHHHHLLL *Z-score 33.1 AR 178 RMSD 10.3A SI 100% |
Structural alignment by DaliLite |