Z-Score:
49.8
AR: 273 RMSD: 0.4A SI: 100% |
||||
1qz3 A (len 309) | 1u4n
A (len 308) |
DaliLite result |
site 1qz3 PLDPVIQQVLDQLNRMPAPDYKHLSAQQFRSQQSLFP PVKKEPVAEVREFDMDLPGRTLKVRMYRPEGVEPPYPALVYYHGGGWVVGDLE code --0QAAAAAAAAAABG0000QB000QAAAAAAAABG0 0000000R0000000000R00000000000O001R0000R00000RRG000QA LCS QAAAAAAAAAABG000 QB000QAAAAA BG0 0000000R0000000000R00000000000 001R0000R00000RRG000QA code --QAAAAAAAAAABG000RQB000QAAAAA BG0QJO0000000R0000000000R00000000000R001R0000R00000RRG000QA 1u4n LDPVIQQVLDQLNRMPAPDYKHLSAQQFRS QQSLFPPVKKEPVAEVREFDMDLPGRTLKVRMYRPEGVEPPYPALVYYHGGGWVVGDLE site *** site 1qz3 THDPVCRVLAKDGRAVVFSVDYRLAPEHKFPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLL code ABQAAAAAAAAABRG00000R0000PB000PAAAAAAAAAAAAAAABQAABR00QAG0000000QAAAAAAAAAAAAAABR0O00R0000 LCS ABQAAAAAAAAABRG00000R0000 B000PAAAAAAAAAAAAAAABQAABR0 QAG0000000QAAAAAAAAAAAAAABR0O00R0000 code ABQAAAAAAAAABRG00000R0000QB000PAAAAAAAAAAAAAAABQAABR0OQAG0000000QAAAAAAAAAAAAAABR0O00R0000 1u4n THDPVCRVLAKDGRAVVFSVDYRLAPEHKFPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLL site ************ site 1qz3 IYPSTGYDPAHPPASIEENAEGYLLTGGMSLWFLDQY LNSLEELTHPWFSPVLYPDLSGLPPAYIATAQYDPLRDVGKLYAEALNKAGVK code 0R0RR000QBG00QAAAABR0RGQG0QAAAAAAAAB0 0R0QAAAB0QAB0QAB0R0RGR000000000QBGQBQAAAAAAAAAAAABR00 LCS 0R0RR00 QB 00QAAAABR0RGQG0QAAAAAAAA 0 0 0QAAAB0QAB0QAB0R0RGR000000000QBGQBQAAAAAAAAAAAABR00 code 0R0RR00RQB000QAAAABR0RGQG0QAAAAAAAAA0G0 0QAAAB0QAB0QAB0R0RGR000000000QBGQBQAAAAAAAAAAAABR00 1u4n IYPSTGYDPAHPPASIEENAEGYLLTGGMSLWFLDQYLN SLEELTHPWFSPVLYPDLSGLPPAYIATAQYDPLRDVGKLYAEALNKAGVK site **** **** **** ****** site 1qz3 VEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDALA code 00000020G00RQAAB0QG0QAAAAAAAAAAAAAAAA-- LCS 000000 0G00RQAAB0Q 0QAAAAAAAAAAAAAAAA code 000000Q0G00RQAAB0QB0QAAAAAAAAAAAAAAAA-- 1u4n VEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDALA site ****** *RATIO : lcs/trimmed_seq_a = 0.954 (= 291/ 305), lcs/trimmed_seq_b = 0.957 (= 291/ 304) |
Structural alignment by ComSubstruct + manual inspection |
DSSP
lllhhhhhhhhhhllllllllllllhhhhhhhhhhlLLLLLLLLLEEEEEEEEELLEEEEEEEEELLLLLLLEEEEEEELLLLLLLLLLL 1qz3 pldpviqqvldqlnrmpapdykhlsaqqfrsqqslfPPVKKEPVAEVREFDMDLPGRTLKVRMYRPEGVEPPYPALVYYHGGGWVVGDLE |||||||||||||||||||||||||||||||||||||||||||||||||||||| 1u4n .ldpviqqvldqlnrmpapdykhlsaqqfrsqqslfPPVKKEPVAEVREFDMDLPGRTLKVRMYRPEGVEPPYPALVYYHGGGWVVGDLE DSSP .llhhhhhhhhhhhllllllhhhllhhhhhhhllllLLLLLLLLLEEEEEEEEELLEEEEEEEEELLLLLLLEEEEEEELLLLLLLLLLL DSSP LLHHHHHHHHHHHLLEEEEEELLLLLLLLLLHHHHHHHHHHHHHHHLLHHHLEEEEEEEEEEELHHHHHHHHHHHHHHHLLLLLLLLEEE 1qz3 THDPVCRVLAKDGRAVVFSVDYRLAPEHKFPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLL |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 1u4n THDPVCRVLAKDGRAVVFSVDYRLAPEHKFPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLL DSSP LLHHHHHHHHHHHLLEEEEELLLLLLLLLLLHHHHHHHHHHHHHHLLLHHHLEEEEEEEEEEELHHHHHHHHHHHHHHHHLLLLLLLEEE DSSP ELLLLLLLLLLLLHHHHHLLLLLLLLHHHHHHHHHHHLLLHHHHHLLLLLHHHLLLLLLLLLEEEEEELLLLLHHHHHHHHHHHHHLLLL 1qz3 IYPSTGYDPAHPPASIEENAEGYLLTGGMSLWFLDQYLNSLEELTHPWFSPVLYPDLSGLPPAYIATAQYDPLRDVGKLYAEALNKAGVK |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 1u4n IYPSTGYDPAHPPASIEENAEGYLLTGGMSLWFLDQYLNSLEELTHPWFSPVLYPDLSGLPPAYIATAQYDPLRDVGKLYAEALNKAGVK DSSP ELLLLLLLLLLLLHHHHHLLLLLLLLHHHHHHHHHHHLLLHHHHHLLLLLHHHLLLLLLLLLEEEEEEEELLLHHHHHHHHHHHHHLLLL 1 DSSP EEEEEELLLLLLHHHHLLLLHHHHHHHHHHHHHHHHHHL 1qz3 VEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDALA ||||||||||||||||||||||||||||||||||||||| 1u4n VEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDALA DSSP EEEEEEEEEELLHHHHLLLLHHHHHHHHHHHHHHHHHHL *Z-score 49.8 AR 273 RMSD 0.4A SI 100% |
Structural alignment by DaliLite |
Not Available |
Z-Score: 0.5
AR: 42 RMSD: 8.6A SI: 2% |
|||
1sfc D (len 74) | 1xtg
B (len 59) |
DaliLite result |
site 1sfc GGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKMLG code --RG000RR0QAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-- LCS AAAAAAAAAAAAAAAAA code --AAAAAAAAAAAAAAAAAB01RG01RRG0000000000RRR00000000000R00R-- 1xtg MDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKMLG site ****** ******* *RATIO : lcs/trimmed_seq_a = 0.243 (= 17/ 70), lcs/trimmed_seq_b = 0.309 (= 17/ 55) |
Structural alignment by ComSubstruct + manual inspection |
DSSP
llllllLLLLHHHHHHHHHHHHHHHHHHhhHHHHhhHHHHhhhHHHHhhhHHHHhhHHHH.hhhhhhhhhhhlll 1sfc ggfirrVTNDARENEMDENLEQVSGIIGnlRHMAldMGNEidtQNRQidrIMEKadSNKT.rideanqratkmlg | 1xtg ....mdENLEQVSGIIGNLRHMALDMGN..EIDT..QNRQ...IDRI...MEKA..DSNKtrideanqratkmlg DSSP ....llHHHHHHHHHHHHHHHHHHHHLL..LLLL..LLLL...LLLL...LLLL..LLLLlllllllllllllll *Z-score 0.5 AR 42 RMSD 8.6A SI 2% |
Structural alignment by DaliLite |
Not Available |
Z-Score:
1.2
AR: 44 RMSD: 8.4A SI: 14% |
|||
1urg D (len 62) | 1xtg
B (len 59) |
DaliLite result |
site 1urg MASRENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRAT code --QAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-- LCS AAAAAAAAAAAAAAAAA code --AAAAAAAAAAAAAAAAAB01RG01RRG0000000000RRR00000000000R00R-- 1xtg MDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKMLG site ****** ******* *RATIO : lcs/trimmed_seq_a = 0.293 (= 17/ 58), lcs/trimmed_seq_b = 0.309 (= 17/ 55) |
Structural alignment by ComSubstruct + manual inspection |
DSSP
LLHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhHHHHhhhHHHHhhhHHHHhhHHHH.........hhhhll 1urg MASRENEMDENLEQVSGIIGNLRHmaLDMGneIDTQnrqIDRImekADSNktRIDE.........anqrat | | |||| 1xtg MDENLEQVSGIIGNLRHMALDMGN..EIDT..QNRQ...IDRI...MEKA..DSNKtrideanqratkmlg DSSP LLHHHHHHHHHHHHHHHHHHHHLL..LLLL..LLLL...LLLL...LLLL..LLLLlllllllllllllll *Z-score 1.2 AR 44 RMSD 8.4A SI 14% |
Structural alignment by DaliLite |
Z-Score:
32.8
AR: 255 RMSD: 7.7A SI: 100% |
||||
1st0 B (len 297) | 1st0
A (len 300) |
DaliLite result |
site 1stB VRLPFSGFRLQKVLRESARD KIIFLHGKVNEASGDGDGEDAVVILEKTPFQVEQVAQLLTGS PELQLQFSNDIYSTYHLFPPRQLNDVKT code --0R00000000RR000QAB R00000000RQBG00RG00000000000000QAAAAAAAABR 00000R0000RG00000000QAAJ0000 LCS 0R00000000RR000Q B R00000000RQBG0 R 0000000000000 QAAAAAAA B 00000 0000RG00000000QAA 0000 code --000R00000000RR000Q BRR00000000RQBG0RRR00000000000003QAAAAAAA BG00000000000RG00000000QAA80000 1stA APVRLPFSGFRLQKVLRESA RDKIIFLHGKVNEASGDGDGEDAVVILEKTPFQVEQVAQLL TGSPELQLQFSNDIYSTYHLFPPRQLNDVKT site site * * 1stB TVVYPATEKHLQKYLRQDLRLIRETGDDYRNITLPH LESQSLSIQWVYNILDKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLI code 0000O00QAAAAA300000000000QAAAA00PAAA AAB0000RQAAAAAAB1R0RQAB0R00OR0Q00G000000QBGRRR0QAB0000 LCS 0000O00QAAAAA 00 0000000QAAAA00 AA AAB 00RQAAAAAAB R0RQAB0R00 R0 0 G000000QBGRRR0QAB0000 code 0000O00QAAAAABG00R0000000QAAAA00QAABQAABG 00RQAAAAAABRR0RQAB0R00RR0R0RG000000QBGRRR0QAB0000 1stA TVVYPATEKHLQKYLRQDLRLIRETGDDYRNITLPHLESQS LSIQWVYNILDKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLI site * * site * 1stB AICHRRGIRSLRDLTPEHLPLLRNILHQGQEAILQRYRMKGDHLRVYLHYLPSYYHLNVHFTALGFEAPGSGVERAHLLAEVIENLECDP code 000RG00RR0QABG0QABQAAAAAAA1AAAAAAAAG0R00QABG000000O0RGRG0000000QBGR00RRGQB0000QAAAAAAAA00Q LCS 000RG00R 0QABG0QABQAAAAAAA1AAAAAAAA 0R00QABG00000 O0RGRG0000000QBGR00RR QB0000QAAAAAAAA 0Q code 000RG00R00QABG0QABQAAAAAAA1AAAAAAAAB0R00QABG000003O0RGRG0000000QBGR00RR0QB0000QAAAAAAAAB0Q 1stA AICHRRGIRSLRDLTPEHLPLLRNILHQGQEAILQRYRMKGDHLRVYLHYLPSYYHLNVHFTALGFEAPGSGVERAHLLAEVIENLECDP site * site 1stB RHYQQRTLTFALRADDPLLKLLQEAQQ code BQAB0G0000000QB0QAAAAAAAA-- LCS BQAB0G0000000QB0QAAAAAAAA code BQAB0G0000000QB0QAAAAAAAAB-- 1stA RHYQQRTLTFALRADDPLLKLLQEAQQS site *RATIO : lcs/trimmed_seq_a = 0.918 (= 269/ 293), lcs/trimmed_seq_b = 0.909 (= 269/ 296) |
Structural alignment by ComSubstruct + manual inspection |
DSSP
..llllLLLLEEEEEEEEELLLLEEEEEEEELLLLLLLLLEEeeeeeeellllhhhhhhHHHLLLLEEEEEEELLEEEEEELLLHhhlleee 1stB ..vrlpFSGFRLQKVLRESARDKIIFLHGKVNEASGDGDGEDavvilektpfqveqvaqLLTGSPELQLQFSNDIYSTYHLFPPRqlndvkt |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| 1stA apvrlpFSGFRLQKVLRESARDKIIFLHGKVNEASGDGDGEDavvilektpfqveqvaqLLTGSPELQLQFSNDIYSTYHLFPPRqlndvkt DSSP llllllLLLLEEEEEEEEELLLLEEEEEEEELLLLLLLLLEEeeeeeeellllhhhhhhHHLLLLEEEEEEEELLEEEEEEELLHhhhleee DSSP eeellllhhhhhhhLLLLEEEEEELHHHHHHLHHHHHHLLLLLLHHHHHHHLLLLLHHHLLEEELLLLLLEEEEELLLLLLLLLLLLEEE 1stB tvvypatekhlqkyLRQDLRLIRETGDDYRNITLPHLESQSLSIQWVYNILDKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLI |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 1stA tvvypatekhlqkyLRQDLRLIRETGDDYRNITLPHLESQSLSIQWVYNILDKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLI DSSP eeellllhhhhhhhLLLLEEEEEELHHHHHHLLLLLHHHHLLLLHHHHHHHLLLLLHHHLLEEELLLLLLEEEEELLLLLLLLLLLLEEE DSSP EEELLLLLLLHHHLLHHHHHHHHHHHHHHHHHHHHHHLLLHHHEEEEEELLLLLLLLEEEEEELLLLLLLLLLLLEEEHHHHHHHHHHLL 1stB AICHRRGIRSLRDLTPEHLPLLRNILHQGQEAILQRYRMKGDHLRVYLHYLPSYYHLNVHFTALGFEAPGSGVERAHLLAEVIENLECDP |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 1stA AICHRRGIRSLRDLTPEHLPLLRNILHQGQEAILQRYRMKGDHLRVYLHYLPSYYHLNVHFTALGFEAPGSGVERAHLLAEVIENLECDP DSSP EEELLLLLLLHHHLLHHHHHHHHHHHHHHHHHHHHHHLLLHHHEEEEEELLLLLLLLEEEEEELLLLLLLLLLLLEEEHHHHHHHHHHLL DSSP LHHHHLLEEEEEELLLHHHHHHHHHHL. 1stB RHYQQRTLTFALRADDPLLKLLQEAQQ. ||||||||||||||||||||||||||| 1stA RHYQQRTLTFALRADDPLLKLLQEAQQs DSSP LHHHHLLEEEEEELLLHHHHHHHHLLLl *Z-score 32.8 AR 255 RMSD 7.7A SI 100% |
Structural alignment by DaliLite |
Z-Score:
41.6
AR: 774 RMSD: 10.5A SI: 94% |
||||
1su4 A (len 994) | 1wpg
A (len 994) |
DaliLite result |
site
************
*********
* 1su4 MEAAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDL LVRILLLAACISFVLAWFEEGEE TITAFVE code --RQABG0QAAAAAABR00QB0000QAAAAAAAAAB00RG000000R0QAA1B0QAAAAA AAAAAAAAAAAAAAAAABGRG0R 01QAABQ LCS RQABG0QAAAAAABR00QB0000QAAAAAAAAA 00RG00000 R0Q B AAAAA AAAAAAAAAAAAAAAAABG 0R 0 BQ code --RQABG0QAAAAAABR00QB0000QAAAAAAAAA000RG00000RR0Q BH AAAAABBGQAAAAAAAAAAAAAAAAABG 0RR0RB BQ 1wpg MEAAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSL WE LVIEQFEDLLVRILLLAACISFVLAWFE EGEETI TA site * ** ****************** site ******************** 1su4 PFVILLILIANAIVGVWQERNAEN A IEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSIL code AAAAAAAAAAAAAAAAAAAAAAAA A AAAAAAB00RRG0000QG0RG00000QABG0000000000R000R00000000RGR00000RQB0 LCS AAAAAAAAAAAAAAAAAAAA A AAAAAAB 0R 0000Q 0RG00000QABG0000000000R000R0 000000RGR00000RQ 0 code BAAAAAAAAAAAAAAAAAAAAHAB000QAAAAAABG0R000000QB0RG00000QABG0000000000R000R03000000RGR00000RQA0 1wpg FVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSIL site ********************* site ***************** 1su4 TGES V SVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQ MAATEQDKTPLQQKLDEFGEQLSKVISLICVA code R00R R 00000RG00RGQB00QAABQBG000RG00R00000000O000QBGQAAAAAAA BGRRG0000QAAAAAAAAAAAAAAAAAAAAAA LCS 0 R R 00000 00 GQB00QAABQBG000RG00R00000000 000QBGQAAAAAAA B RR 0000QAAAAAAAAAAAAAAAAAAAAAA code 0 RGRG0000000003GQB00QAABQBG000RG00R00000000R000QBGQAAAAAAAABRRR 0000QAAAAAAAAAAAAAAAAAAAAAA 1wpg T GESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAATE QDKTPLQQKLDEFGEQLSKVISLICVA site ***************** site*** *************** *** *++++++ 1su4 VWLINIGHFN DPVHGGS WIRGAIYYFKIAVALAVAAIPEG LPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ code AAAABQAAQB 0QABRR0 RHAAAAAAAAAAAAAAAABG00R QAAAAAAAAAAAAAAAAABR000RGQAAAAAAAB0R000000GRGRGRRG LCS AAAABQ QB 0QA 0 R AAAAAAAAAAAABG R QAAAAAAAAAAAAAAAAABR000RGQAAAAAAAB0R000000 GRGRRG code AAAABQBGQBGR0QAG 0QB11R QAAAAAAAAAAAABG RQAQAAAAAAAAAAAAAAAAABR000RGQAAAAAAAB0R0000000QGRGRRG 1wpg VWLINIGHFNDPVHGG SWIRGA IYYFKIAVALAVAAI PEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ site*** ************ ****** *++++++ site 1su4 MSV CKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVE code 000 0000000000RRG000000000000RGRG00000RRG000QABGQAAAAAAAAAB1BGRG00000QABRG000000QAAAAAAAAAA LCS 000 0000000000 RG0000000000 RGRG00000RRG000QABGQAAAAAAAAAB1BGRG0000 QABRG000000QAAAAAAAAAA code 000R0000000000 RG0000000000RGRGRG00000RRG000QABGQAAAAAAAAAB1BGRG0000RQABRG000000QAAAAAAAAAA 1wpg MSVCKMFIIDKVDG DFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVE site site 1su4 KMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSS RA AVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGP code ABRQBR001QBG0QAAAB0QAAAAAAAB000R00R000QB0RG00000000R0Q BQ BGR000000002HAAAABGRG000RRG00000QA LCS ABRQBR001QBG0QAAAB0QAAAAAAA 000R00R000QB0RG0000000 R Q BQ B 00000000 AAAABGR 000 RG00000QA code ABRQBR001QBG0QAAAB0QAAAAAAA8000R00R000QB0RG0000000 RGQABQAB 000000000QAAAAABGR00000RG00000QA 1wpg KMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSP AKSSRAAV GNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGP site site 1su4 VKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEV MGSIQLCRDAGIRVIMITGDNKG code AAAAAAAAAAAABGGQGR00000000RR0000QABG0QBGQAAAAAABHR0000000000R0000RQ AAAAAAAAABR0000000RG0QA LCS AAAAAAAAAAAAB QGR00000000 R0000QABG QBGQAAAAAABHR0000000000R000 Q AAAAAAAAABR0000000RG0QA code AAAAAAAAAAAAB00QGR000000000R0000QABGRQBGQAAAAAABHR0000000000R000 QBAAAAAAAAAABR0000000RG0QA 1wpg VKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPR KEVMGSIQLCRDAGIRVIMITGDNKG site site * * 1su4 TAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVN DAPALKKAEIGIAM code AAAAAAAAB1R00R0001QABG00QAAAABG0QAAAAAAAB00R000R00QAAAAAAAAAAAABR0R0000000QA AQAAAABGR00000 LCS AAAAAAAAB1R00R 00 ABG00QAAAABG0QAAAAAAAB0 R 0 R00QAAAAAAAAAAAABR0R000000 QA A AAAABGR00000 code AAAAAAAAB1R00RB00RRABG00QAAAABG0QAAAAAAAB0GRG01R00QAAAAAAAAAAAABR0R000000GQABA AAAABGR00000 1wpg TAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDA PALKKAEIGIAM site * * site ******************** *************** ****** 1su4 GSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGL PATALGFN code QBG0QAAAABGR000QBR0QAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAABR000R00QAAAAAAAA81BGQ AAAAAAB0 LCS QBG0QAAAABGR00 QBR0QAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAA ABR000R00QAAAAAA BG AAAAAAB0 code QBG0QAAAABGR00RQBR0QAAAAAAAAAAAAAAAAAAHAAAAAAAAAAAAAAAAAAAHABR000R00QAAAAAA BG1RAAAAAAAAAB0 1wpg GSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWV NLVTDGLPATALGFN site ******************** ******** ************* site ** ********************* *** 1su4 PPDLDIMDRPPRSPKEPLIS GWLFFRYMAIGGYVGAATVGAAAWWFMY AEDGPGVTYHQ L THFMQCTEDHPHFEG LDCEIFEAPEPMTMA code 000QBQABG0000QBG0R00 QAAAAAAAHAAA9AAAAHAAAAAAAG0R 00RG0RRRRG0 R ABQAAQA80QQBG00 G0QAAAB0QAAAAAA LCS 000QBQABG0000QB 0R00 QAAAAAAA AAA AAAA AAAAAAA 0R 00 0 0 R ABQA QA 0Q BG0 G0QAAAB0QAAAAAA code 000QBQABG0000QB00R000QAAAAAAA AAAAAAAAAAAAAAAAB0RGQG00 0 0QBRQAABQABQAB0Q BG0GRG0QAAAB0QAAAAAA 1wpg PPDLDIMDRPPRSPKEPLISGWLFFRYMA IGGYVGAATVGAAAWWFMYAEDGP G VTYHQLTHFMQCTEDH PHFEGLDCEIFEAPEPMTMA site *********** ************ *** site ***************** **************** *** ********************* 1su4 LSVLVTIEMCNALNSLSENQ SLMRMPPWVNIWLLGSICLSMSLHFL ILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFIARNYLEG code AAAAHAAAAAAAAAAR0R00 0QAA00QAAGQAAAAAAAAAAAAAAA BGBGQAHAAABR00000QAAAAAAAAA1AAAAAAAAAAAAAAB0Q0-- LCS AAAA AAAAAAAAAA 0 0 0QA 00QAAGQAAAAAAAAAAAAAAA B Q H AABR00000QAAAAAAAAA1AAAAAAAAAAAA B0 0 code AAAAAAAAAAAAAAAB0 0RG0QAB00QAAGQAAAAAAAAAAAAAAAAB1R QBHQAABR00000QAAAAAAAAA1AAAAAAAAAAAAB1B0 0R-- 1wpg LSVLVTIEMCNALNSLS ENQSLMRMPPWVNIWLLGSICLSMSLHFLILYV DPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFIARN YLEG site ***************** **************** *** ********************* *RATIO : lcs/trimmed_seq_a = 0.890 (= 881/ 990), lcs/trimmed_seq_b = 0.890 (= 881/ 990) |
Structural alignment by ComSubstruct + manual inspection |
DSSP
.................lllllLLLHHHHHHHLLLlllllllhhhhhhhhhhhllllllllllllhhhhhlhhhhhhhhhhhhhhhhhhhhhhhhlllllllhhhhh 1su4 .................meaahSKSTEECLAYFGVsettgltpdqvkrhlekyghnelpaeegkslwelvieqfedllvrilllaacisfvlawfeegeetitafve 1wpg meaahsksteeclayfgvsettGLTPDQVKRHLEK........................................................................ DSSP lllhhhllhhhhhhhhllllllLLLHHHHHHHHHH........................................................................ DSSP hhhhhhhhhhhhhhhhhhhhhhhhhhhllhhhllllleeellllllleellhhhllllleeeelllllllleeeeeeellllleeELLLL 1su4 pfvillilianaivgvwqernaenaiealkeyepemgkvyradrksvqrikardivpgdivevavgdkvpadirilsiksttlrvDQSIL 1wpg ................................................................................yghneLPAEE DSSP ................................................................................lllllLLLLL DSSP L........................................llllleellllllllllllhhhllleellLLEEE.ELLEE................EEEE.. 1su4 T........................................gesvsvikhtepvpdpravnqdkknmlfsGTNIA.AGKAL................GIVA.. 1wpg GkslwelvieqfedllvrilllaacisfvlawfeegeetitafvepfvillilianaivgvwqernaenaIEALKeYEPEMgkvyradrksvqrikaRDIVpg DSSP LllhhhhhhhhlllhhhhhhhhhhhhhhhhhhlllllllllllhhhhhhhhhhhhhhhhhhhhhhllllhHHHHHhHLLLEeeeellllllleeeehHHLLll DSSP ............................................................................elhhhlllllllllllllllLLLHHHHHHHHHHHHHHHHHHHHHHH 1su4 ............................................................................ttgvsteigkirdqmaateqDKTPLQQKLDEFGEQLSKVISLICVA |||||||||||||||||||||||||| 1wpg divevavgdkvpadirilsiksttlrvdqsiltgesvsvikhtepvpdpravnqdkknmlfsgtniaagkalgivattgvsteigkirdqmaateqDKTPLQQKLDEFGEQLSKVISLICVA DSSP leeeeellllllleeeeeeellllleeelhhhhllllleellllllllllllhhhllleelllleeeeleeeeeeeelhhhlhhhhhhhhhlllllLLLHHHHHHHHHHHHHHHHHHHHHHH DSSP HHHLLHHHLllhhhLLLL.LHHHhHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHHLLEELLLLHHHHHHHLLLEEEEELLLLLLLLL 1su4 VWLINIGHFndpvhGGSW.IRGAiYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 1wpg VWLINIGHFndpvhGGSWiRGAI.YYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ DSSP HHHHLLLLLlllllLLLLlLLHH.HHHHHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHLLLEEELLLLHHHHHLLLLEEEELLLLLLLLLL DSSP LEEEEEEEEEEEELLEEEEEEEEELLLLLLLLLLEEELLEELLHHHLHHHHHHHHHHHHLLLLEEEEELLLLEEEEELLHHHHHHHHHHH 1su4 MSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVE |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 1wpg MSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVE DSSP LEEEEEEEEEEEELLEEEEEEEEELLLLLLLLLLEEELLEELLHHHLHHHHHHHHHHHHLLLLEEEEELLLLEEEEELLHHHHHHHHHHH DSSP HHLLLLLLLLLLLHHHHLLHHHHHHHHHEEEEEEEEEELLLLEEEEEEEELLLLLLLLLLEEEEEELHHHHHHLEEEEEELLEEEELLHH 1su4 KMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGP |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 1wpg KMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGP DSSP HHLLLLLLLLLLLHHHHLLHHHHHHHHHEEEEEEEEEELLLLEEEEEEEELLHHHHHHLLEEEEEELHHHHHHLEEEEEELLEEEELLHH DSSP HHHHHHHHHHHHHHLLLLLEEEEEEEELLLLLHHHLLLLLHHHHHHHLLLEEEEEEEEEELLLLLLHHHHHHHHHHLLLEEEEEELLLHH 1su4 VKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKG |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 1wpg VKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKG DSSP HHHHHHHHHHHHLLLLLLLEEEEEEEELLLLLHHHLLLLLHHHHHHHLLLEEEEEEEEEELLLLLLHHHHHHHHHHLLLEEEEELLLLHH DSSP HHHHHHHHHLLLLLLLLLLLLEEEHHHHHLLLHHHHHHHHHHLLEEELLLHHHHHHHHHHHHLLLLLEEEEELLHHHHHHHHHLLEEEEE 1su4 TAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAM |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 1wpg TAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAM DSSP HHHHHHHHLLLLLLLLLLLLLEEEHHHHHHLLHHHHHHHHHHLLEEELLLHHHHHHHHHHHHHLLLLEEEEELLHHHHHHHHHLLEEEEE DSSP LLLLHHHHHLLLEEELLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLHHHHHHHHHHHLLHHHHHHLLL 1su4 GSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFN |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 1wpg GSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFN DSSP LLLLHHHHHLLLEEELLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLHHHHHHHHHLLLHHHHHHHLLL DSSP LLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHLLLlLLLLLLLL.LLLLHHHLLLLH.HHLLlLLHHHHHLHHHHHHH 1su4 PPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAeDGPGVTYH.QLTHFMQCTEDH.PHFEgLDCEIFEAPEPMTMA ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| 1wpg PPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYA.EDGPGVTYhQLTHFMQCTEDHpHFEG.LDCEIFEAPEPMTMA DSSP LLLLHHHHLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHLLLL.LLLLLLLLlHHHHLLLLLLLLlLLLL.LLHHHHHLHHHHHHH DSSP HHHHHHHHHHHLHHHLLLLLLLLLLLHHHLHHHHHHHHHHHHHHHHHHHLLHHHHHLLLLLLLHHHHHHHHHHHLHHHHHHHHHHHHHHHHLLl 1su4 LSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFIARNYLEg ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 1wpg LSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFIARNYLEg DSSP HHHHHHHHHHHHHLLLLLLLLLLLLLHHHLHHHHHHHHHHHHHHHHHHHLLLLHHHHLLLLLLHHHHHHHHHHHLHHHHHHHHHHHHHHLLLLl *Z-score 41.6 AR 774 RMSD 10.5A SI 94% |
Structural alignment by DaliLite |