Search of the ASTRAL dataset for d1j7ma

Backbone structures are obtained using ProteinViewer, where N-terminal is colored red and C-terminal blue.
Superpositions are computed by the DaliLite server.
Z-Score is a measure of quality of the alignment. As a general rule, above 20 means the two structures are definitely homologous, between 8 and 20 means the two are probably homologous, between 2 and 8 is a grey area, and a Z-Score below 2 is not significan
AR: number of Aligned Residues (=length of the alignment).
RMSD: superimposed Root Mean Square Deviation, calculated using all structurally equivalent C-alpha atoms.
SI: Sequence Identity between the two chains
P-value is used in FATCAT to evaluate the significance of structural similarity detected by FATCAT, the probability of observing a greater score. (Structure pairs with probability < 0.05 are significantly similar)
EP: number of Equivalent Positions. Number of residue pairs that are structurally equivalent (= length of the alignment, similarity).
Twist: number of rigid-body movements around pivot points (hinges) introduced in the reference protein.
LCS: longest common subsequence of the two D2 code sequences.
Click the images to view larger image.
See the bottom for brief explanation of the D2 codes.

Query chain: d1j7ma_ (60 residues)
		Residue: SWMSTVGGNSGGAPCVFPFTFLGNKYESCTSAGRSDGKMWCATTANYDDDRKWGFCPDQG D2 Code: --0000001RR000000O000R0G00R000R0RGRG000000RGR0QB0RR0000000--

Superposition (or the target chain)	DaliLite result	FATCAT result	D² code sequences


D² LCS ratio: 0.86 (=48/56)
d1eaka4 (whole, 58 residues)
	Z-Score: 10.9 AR: 58 RMSD: 1.3A SI: 55%	P-Value: 0.00 EP: 58 RMSD: 1.31A Twist: 0	Qry: SWMSTVGGNSGGAPCVFPFTFLGNKYESCTSAGRSDGKMWCATTANYDDDRKWGFCPDQG D2 : --0000001RR000000O000R0G00R000R0RGRG000000RGR0QB0RR0000000-- LCS: ---000001RR00000-O000-0G00R000R0RGR-00000-RGR0QB0R-00000---- Tgt: ALFTMGGNAEGQPCKFPFRFQGTSYDSCTTEGRTDGYRWCGTTEDYDRDKKYGFCPET D2 : --000001RRR00000O0000RG00R000R0RG1BR00000RGR0QAB0R00000R-- LCS: --000001RR-00000O0000-G00R000R0RG--R00000RGR0Q-B0R00000---
d1eaka5 (whole, 58 residues)
	Z-Score: 10.9 AR: 58 RMSD: 1.6A SI: 97%	P-Value: 0.00 EP: 58 RMSD: 1.64A Twist: 0	Qry: SWMSTVGGNSGGAPCVFPFTFLGNKYESCTSAGRSDGKMWCATTANYDDDRKWGFCPDQG D2 : --0000001RR000000O000R0G00R000R0RGRG000000RGR0QB0RR0000000-- LCS: ----00001RR00000-O000R-G00R000R0RG--000000RGR0QB0R-000000--- Tgt: AMSTVGGNSEGAPCVFPFTFLGNKYESCTSAGRSDGKMWCATTANYDDDRKWGFCPDQ D2 : --R00001RRR00000O000RRG00R000R0RG10R00000RGR0QAB0R000000-- LCS: ---00001RR-00000O000R-G00R000R0RG-0-00000RGR0Q-B0R000000--
d1l6ja3 (whole, 59 residues)
	Z-Score: 11.0 AR: 59 RMSD: 1.6A SI: 54%	P-Value: 0.00 EP: 59 RMSD: 1.64A Twist: 0	Qry: SWMSTVGGNSGGAPCVFPFTFLGNKYESCTSAGRSDGKMWCATTANYDDDRKWGFCPDQG D2 : --0000001RR000000O000R0G00R000R0RGRG000000RGR0QB0RR0000000-- LCS: --000000-RR00000-O000R0G00R000R-RGR-00000-RGR0Q-0R-000000--- Tgt: VVVPTRFGNADGAACHFPFIFEGRSYSACTTDGRSDGLPWCSTTANYDTDDRFGFCPSE D2 : --000000RBRR00000O000R0G00R000RHRGQBR00000RGR0QAA0R000000-- LCS: --000000R-R-00000O000R0G00R000R-RG--R00000RGR0Q--0R000000--

D² LCS ratio: 0.84 (=47/56)
d1eaka3 (res2 - res61)
	Z-Score: 10.1 AR: 59 RMSD: 1.7A SI: 49%	P-Value: 0.00 EP: 58 RMSD: 1.46A Twist: 0	Qry: SWMSTVGGNSGGAPCVFPFTFLGNKYESCTSAGRSDGKMWCATTANYDDDRKWGFCPDQG D2 : --0000001RR000000O000R0G00R000R0RGRG000000RGR0QB0RR0000000-- LCS: --000000---000000O000R-G00R000R0RGR-00000-RG-0QB0R-000000--- Tgt: GQVVRVKYGNADGEYCKFPFLFNGKEYNSCTDTGRSDGFLWCSTTYNFEKDGKYGFCPHE D2 : --0000000QG0RG0000O000RRG00R000R0RGQBR00000RG00QAB0R000000-- LCS: --0000000--0--0000O000R-G00R000R0RG--R00000RG0-Q-B0R000000--
d1hs6a2 (res33 - res92)
	No Significant Similarites	P-Value: 0.50 EP: 22 RMSD: 3.01A Twist: 0	Qry: SWMSTVGGNSGGAPCVFPFTFLGNKYESCTSAGRSDGKMWCATTANYDDDRKWGFCPDQG D2 : --0000001RR000000O000R0G00R000R0RGRG000000RGR0QB0RR0000000-- LCS: --000000-RR000000-000R0-00R000-0R-RG000000R--0QB0--0000000-- Tgt: TLTGTAALTVQSQEDNLRSLVLDTKDLTIEKVVINGQEVKYALGERQSYKGSPMEISLPI D2 : --0000000000RG0R000000000R000R0000RRG000000000R0QB00000000-- LCS: ------000000R--R000000000R000R0000RRG000000---R0QB00000000--
d1krha1 (res15 - res74)
	Z-Score: 0.3 AR: 36 RMSD: 3.4A SI: 3%	P-Value: 0.56 EP: 38 RMSD: 2.95A Twist: 1	Qry: SWMSTVGGNSGGAPCVFPFTFLGNKYESCTSAGRSDGKMWCATTANYDDDRKWGFCPDQG D2 : --0000001RR000000O000R0G00R000R0RGRG000000RGR0QB0RR0000000-- LCS: --000000-R-000000-000-0-00-000-0RGRG000000RGR0QB0--0000000-- Tgt: SDSTITFDIQLDDGQPDIHFLAGQYVNVTLPGTTETRSYSFSSQPGNRLTGFVVRNVPQG D2 : --GG000000000R00000000B00000000RGRG000000RG00R0QB000000R00-- LCS: -------000000R00000000-00000000RGRG000000RG--R0QB000000-00--
d1q2ba_ (res91 - res150)
	No Significant Similarites	P-Value: 0.78 EP: 18 RMSD: 3.15A Twist: 0	Qry: SWMSTVGGNSGGAPCVFPFTFLGNKYESCTSAGRSDGKMWCATTANYDDDRKWGFCPDQG D2 : --0000001RR000000O000R0G00R000R0RGRG000000RGR0QB0RR0000000-- LCS: --000000-R-000000-000R0G00-000-0RGRG000000---0QB0R-0000000-- Tgt: SIDFVTQSAQKNVGARLYLMASDTTYQEFTLLGNEFSFDVDVSQLPCGLNGALYFVSMDA D2 : --000000R00000000000R0QG000000RGRG0000000RQBG00RG0R00000R0-- LCS: --000000R000000000--R0-G000000RGRG0000000-QB-0-R-0-00000-0--
d1whoa_ (res2 - res61)
	No Significant Similarites	P-Value: 0.69 EP: 40 RMSD: 3.80A Twist: 1	Qry: SWMSTVGGNSGGAPCVFPFTFLGNKYESCTSAGRSDGKMWCATTANYDDDRKWGFCPDQG D2 : --0000001RR000000O000R0G00R000R0RGRG000000RGR0QB0RR0000000-- LCS: --0000001R-000000-000-0G00R000-0RGRG000000---0--0RR0000000-- Tgt: PKVTFTVEKGSNEKHLAVLVKYEGDTMAEVELREHGSDEWVAMTKGEGGVWTFDSEEPLQ D2 : --0000001R00QBG00000000RG00R0000000RGRG00000000RR000000RG0-- LCS: --0000001R00---00000000-G00R0000---RGRG00000000RR000000--0--
d1wi1a_ (res11 - res70)
	No Significant Similarites	P-Value: 0.45 EP: 29 RMSD: 3.43A Twist: 0	Qry: SWMSTVGGNSGGAPCVFPFTFLGNKYESCTSAGRSDGKMWCATTANYDDDRKWGFCPDQG D2 : --0000001RR000000O000R0G00R000R0RGRG000000RGR0QB0RR0000000-- LCS: --000000-RR000000-000R0G00-000-0RGRG000000R-R0--0--0000000-- Tgt: SGYLWAIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELLQLDGYTVDYTDPQP D2 : --0000000R0RRG0000000000R0RBG000000RG0RG0000000RR000000000-- LCS: ----00000-0RR-000000000-R0--G000000RG-RG000000-RR000000000--

D² LCS ratio: 0.82 (=46/56)
d2fn2a_ (whole, 59 residues)
	Z-Score: 9.2 AR: 59 RMSD: 1.8A SI: 53%	P-Value: 0.00 EP: 59 RMSD: 1.82A Twist: 0	Qry: SWMSTVGGNSGGAPCVFPFTFLGNKYESCTSAGRSDGKMWCATTANYDDDRKWGFCPDQG D2 : --0000001RR000000O000R0G00R000R0RGRG000000RGR0QB0RR0000000-- LCS: ---00000-R-000000O000R-G--R000-0RGRG000000RGR0QB0R-00000---- Tgt: VLVQTRGGNSNGALCHFPFLYNNHNYTDCTSEGRRDNMKWCGTTQNYDADQKFGFCPMA D2 : --00000GQBR000000O000RRGR0R000RQBGRG000000RGR0QAB0R00000R-- LCS: --00000---R000000O000R-GR0-000R--GRG000000RGR0Q-B0R00000---