[Glycine-rich alpha-N-cap]

Given below is the representative amino acid fragments, "paradigm", for each I-sites cluster of this motif:

Cluster ID

(paradigm)
Backbone structure
Amino acid sequence
DSSP code sequence
5-tile code sequence
PB sequence
3033

(2amg   151)
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       DDG
      BSS
      0RG
      CKB
4018

(1kif A 7)
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       GAGV
      __SH
      0RGQ
      IKLM
7007

(3grs   26)
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      IGGGSGG
      E__SHHH
      00RGQAA
      HIKLMMM
10011

(1nhp   155)
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      IGSGYIGIEA
      E__SHHHHHH
      00RGQAAAAA
      HIKLMMMMMM
10060

(3grs   8)
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     VIGGGSGGLA
     EE__SHHHHH
     000RGQAAAA
     EHIKKMMMMM
3029

(1phg   148)
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    CNF
    EEH
    0RQ
    BLM
8190

(3grs   24)
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    LVIGGGSG
    EEE__SHH
    0000RGQA
    CEHIKKMM
9001

(3grs   189)
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  RSVIVGAGY
  EEEEE__SH
  0000000GQ
  DCDEHIAFK
9090

(3grs  23)
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   YLVIGGGSG
  EEEE__SHH
  00000RGQA
  DCEHIKKMM
10026

(3grs  24)
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    LVIGGGSGGL
    EEE__SHHHH
    0000RGQAAA
    CEHIKKMMMM
10043

(1pbe  5)
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   VAIIGAGPSG
   EEEE__SHHH
   00000RGQAA
  CCEHIKLMMM
11074

(1pbe  5)
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   VAIIGAGPSGL
   EEEE__SHHHH
   00000RGQAAA
   CCEHIKLMMMM
4097

(3grs  62)
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         GCVP
      SHHH
      0QHA
      MMMM


[The DSSP code]

[The PB label]

[The 5-tile code]