• Backbone structures are obtained using ProteinViewer, where N-terminal is colored red and C-terminal blue.
• Click the images to view larger image.
• In the images of superimposition, the C-terminal of the first sequence is connected with the N-terminal of the second sequecne (because of the DaliLite output format).
• DSSP / D2 code / PB code: "*" indicates the position of the residues that assume different DSSP states / D2 codes / PB codes.
  
• dAngle-1: "*" indicates the position of the residues where the difference of the PHI angles or PSI angles between the two chains is more than or equal to 100°.  (dPHI=X or dPSI=X)
• dAngle-2: "*" indicates the position of the residues where the difference of the PHI angles and PSI angles between the two chains is more than or equal to 30°.  (dPHI>=3 and dPSI>=3)
• Angle-ALL: Union of "*" of dAngle-1 and "*" of  dAngle-2
• Core: "0" indicates the position of the residues where the difference of the PHI angles and PSI angles between the two chains is less than 10°.  (dPHI=0 and dPSI=0)
• FATCAT / FlexProt / RAPIDO / DynDom: "n" indicates the residues of the n-th rigid body. "*" indicates flexible regions. " " indicates not-aligned residues.
• Hinge-ALL: "*" indicates the position of the flexible or hinge regions identified by either FATCAT, FlexProt, RAPIDO, or DynDom. 

(1) Cluster 11

				Z-Score: 20.0 AR: 177 RMSD: 12.1A SI: 100%
1dcl A (len 216)	1dcl B (len 216)		DaliLite result

	1         2         3         4         5         6         7         8         9        10 1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
1dcA 1dcB	PSALTQPPSASGSLGQSVTISCTGTSSNVGGYNYVSWYQQHAGKAPKVIIYEVNKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYEGSDNFV PSALTQPPSASGSLGQSVTISCTGTSSNVGGYNYVSWYQQHAGKAPKVIIYEVNKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYEGSDNFV
DSSP	* *   *** *   *      *********             *                               *   ***        *  ** *
D2 code	*                 ****** *               *        * *                        **       *** *
PB code	**    **********    ******** ***                     ***  *                      *****  ***  ***
dAngle-1 dAngle-2	**                     ***** ***                       **                                  * ***    *                   *   ** * *                         *  *                               *** *
Angle-ALL	+++                   ++++++ +++                       +++  +                              ++++++
Core	00               0             00      0      0         0           0     00   0     00
FATCAT FlexProt RAPIDO DynDom	1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111    222222222222222222222*****   2222222222222222222222222222222222222222222222222222222222222****222   11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
Hinge-ALL	++++                    +++++++++                                                            ++++

	11        12        13        14        15        16        17        18        19        20 1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
1dcA 1dcB	FGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVT FGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVT
DSSP	*  *  * * *                                   *          * **
D2 code	*     *                      *              *            ***          *                *
PB code	*****   ******                             *****     *     *    ****       *               *
dAngle-1 dAngle-2	**      *    *     ***
Angle-ALL	++     +++
Core	0           0  000  0 0   0 000        00000  0               0      00    0    0         0      00
FATCAT FlexProt RAPIDO DynDom	1111111111222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 1111111112222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 222222222**11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 11111111***22222222222222222222222222222222222222222222222222222222222222222222222222222222222222222
Hinge-ALL	+++

	21        22        23        24        25        26        27        28        29        30 1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
1dcA 1dcB	HEGSTVEKTVAPTECS HEGSTVEKTVAPTECS
DSSP	****       * *
D2 code	*         **
PB code	****
dAngle-1 dAngle-2	**              *
Angle-ALL	+++
Core	00
FATCAT FlexProt RAPIDO DynDom	222222222222222 2222222222222222 111111111111* 22222222222222
Hinge-ALL	++++

(2) Cluster 12

				Z-Score: 43.0 AR: 427 RMSD: 10.8A SI: 99%
1ddt (len 523)	1mdt A (len 523)		DaliLite result

	1         2         3         4         5         6         7         8         9        10 1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
1ddt 1mdt	GADDVVDSSKSFVMENFSSYHGTKPGYVDSIQKGIQKPKSGTQGNYDDDWKGFYSTDNKYDAAGYSVDNENPLSGKAGGVVKVTYPGLTKVLALKVDNAE GADDVVDSSKSFVMENFSSYHGTKPGYVDSIQKGIQKPKSGTQGNYDDDWKGFYSTDNKYDAAGYSVDNENPLSGKAGGVVKVTYPGLTKVLALKVDNAE
DSSP	******               *                                   ***                            *
D2 code	**                  *  *          *                        **    *                          *
PB code	* *    *                              ***          ****                *  ****
dAngle-1 dAngle-2
Angle-ALL
Core	0    0    0   0 00000 000000     0    0 0000  00000 000000000   0000      000000000000 0      00
FATCAT FlexProt RAPIDO DynDom	1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111   11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
Hinge-ALL	++

	11        12        13        14        15        16        17        18        19        20 1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
1ddt 1mdt	TIKKELGLSLTEPLMEQVGTEEFIKRFGDGASRVVLSLPFAEGSSSVEYINNWEQAKALSVELEINFETRGKRGQDAMYEYMAQACA__X TIKKELGLSLTEPLMEQVGTEEFIKRFGDGASRVVLSLPFAEGSSSVEYINNWEQAKALSVELEINFETRGKRGQDAMYEYMAQACA__X
DSSP	*                                                                ****
D2 code	*  *           * *                                     *
PB code	**** *
dAngle-1 dAngle-2
Angle-ALL
Core	00  00 0      0000 0 000 0  000  00  0 0000  0 0    00000 000   000 00   0000000  00
FATCAT FlexProt RAPIDO DynDom	111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
Hinge-ALL

	21        22        23        24        25        26        27        28        29        30 1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
1ddt 1mdt	__SCINLDWDVIRDKTKTKIESLKEHGPIKNKMSESPNKTVSEEKAKQYLEEFHQTALEHPELSELKTVTGTNPVFAGANYAAWAVNVAQVIDSETADNL __SCINLDWDVIRDKTKTKIESLKEHGPIKNKMSESPNKTVSEEKAKQYLEEFHQTALEHPELSELKTVTGTNPVFAGANYAAWAVNVAQVIDSETADNL
DSSP	*         **                                 ***    *            **
D2 code	**                                *   *     ****
PB code	*                   *          *   ****               **           * *  *             *
dAngle-1 dAngle-2	*
Angle-ALL	+
Core	000 0000 0    00      0  0   0000   0    0000  0  00  00    0      00000000 0 0 000  000000000
FATCAT FlexProt RAPIDO DynDom	11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111   11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111   11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111   11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
Hinge-ALL

	31        32        33        34        35        36        37        38        39        40 1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
1ddt 1mdt	EKTTAALSILPGIGSVMGIADGAVHHNTEEIVAQSIALSSLMVAQAIPLVGELVDIGFAAYNFVESIINLFQVVHNSYNRPAYSPGHKTQPFLHDGYAVS EKTTAALSILPGIGSVMGIADGAVHHNTEEIVAQSIALSSLMVAQAIPLVGELVDIGFAAYNFVESIINLFQVVHNSYNRPAYSPGHKTQPFLHDGYAVS
DSSP	*   *                       *     *****
D2 code	*           *     *                  *   * ****                         ******
PB code	**** *                         * ****** ****
dAngle-1 dAngle-2	* *                             ** **                                                     * *                          * * * *
Angle-ALL	+ +                          + +++ ++
Core	000 0 0000  00  00000 0000     000   00   0  00           0      0 00 0     00  0         00  0000
FATCAT FlexProt RAPIDO DynDom	1111111111111111111111111111111111111111111111111111111111111111111111111111111111111   222222222222 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111122222 1111111111111111111111111111111111111111111111111111****11111111111111111111111111****    2222222222 11111111111111111111111111111111111111111111111111111111111111111111111111111111***********222222222
Hinge-ALL	++++                        +++++++++++   ++

	41        42        43        44        45        46        47        48        49        50 1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
1ddt 1mdt	WNTVEDSIIRTGFQGESGHDIKITAENTPLPIAGVLLPTIPGKLDVNKSKTHISVNGRKIRMRCRAIDGDVTFCRPKSPVYVGNGVHANLHVAFHRSSSE WNTVEDSIIRTGFQGESGHDIKITAENTPLPIAGVLLPTIPGKLDVNKSKTHISVNGRKIRMRCRAIDGDVTFCRPKSPVYVGNGVHANLHVAFHRSSSE
DSSP	*      *****                            *                *     ****                          * *
D2 code	* ***                          ****                        *               *               *
PB code	**** *                        ****                      ****        *
dAngle-1 dAngle-2	***                           **           *   *                            *
Angle-ALL	+++ +                         ++ +
Core	0 000  00                  000  0 00           000 0  00000  00 0        000  000 0  0  00000 0 0
FATCAT FlexProt RAPIDO DynDom	2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 222222222***  22222222222222222222222222***22222222222222222222222222222222222222222222222222222222* 2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222
Hinge-ALL	++++++                         +++                                                        +

	51        52        53        54        55        56        57        58        59        60 1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
1ddt 1mdt	KIHSNEISSDSIGVLGYQKTVDHTKVNSKLSLFFEIKS KIHSNEISSDSIGVLGYQKTVDHTKVNSKLSLFFEIKS
DSSP	* *         ******
D2 code	*          *               *
PB code	*         * *              *
dAngle-1 dAngle-2
Angle-ALL
Core	0     000   0 0     0
FATCAT FlexProt RAPIDO DynDom	22222222222222222222222222222222222222 22222222222222222222222222222222222222 ********222222222222222222222222222222 22222222222222222222222222222222222222
Hinge-ALL	++++++++

(3) Cluster 13

				Z-Score: 27.2 AR: 190 RMSD: 2.0A SI: 98%
1esg B (len 212)	2bam A (len 207)		DaliLite result

	1         2         3         4         5         6         7         8         9        10 1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
1esg 2bam	MEVEKEFITDEAKELLSKDKLIQQAYNEVKTSICSPIWPATSKTFTINNTEKNCNGVVPIKELCYTLLEDTYNWYREKPLDILKLEKKKGGPIDVYKEFI MEVEKEFITDEAKELLSKDKLIQQAYNEVKTSICSPIWPATSKTFTINNTEKNCNGVVPIKELCYTLLEDTYNWYREKPLDILKLEKKKGGPIDVYKEFI
DSSP	*       *     *      * *****        ***    ****    * *** * **
D2 code	*                               *           **     *** *    * *** **** **
PB code	*                                ****            *                    ********   ********
dAngle-1 dAngle-2	* **       **                                                                             *          **         **
Angle-ALL	+ ++       ++         ++
Core	00      0000  0     00000 0 00  00000 0    000000 0           00 00    00      00         0 00
FATCAT FlexProt RAPIDO DynDom	1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111122222222222222222 1111111111111111111111111111111111111111111111111111111***********1111111111**           *****1111** No dynamic domains were found
Hinge-ALL	+++++++++++          ++++++++++++++++++    ++

	11        12        13         14        15        16        17        18        19       20 1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
1esg 2bam	ENSELKRVGMEFETGNISSAHRSMNKLLLGLKHGEIDLAIILMPIKQLAYYLTDRVTNFEELEPYFELTEGQPFIFIGFNAEAYNSNVPLIPKGSDGMSK ENSELKRVGMEFETGNISSAHRSMNKLLLGLKHGEIDLAIILMPIKQLAYYLTDRVTNFEELEPYFELTEGQPFIFIGFNAEAYNSNVPLIPKGSDGMSK
DSSP	****                                               *                                ***      *****
D2 code	** *                                                         *  *    *                    *   ****
PB code	****                                              ****               *                     *******
dAngle-1 dAngle-2	**                                                                                         *  * * **                                                                                          * ****
Angle-ALL	+++                                                                                         + ++++
Core	00000    0 0000000000 000   000 000 000000 0000    00000  00  0   0000000000  0             0
FATCAT FlexProt RAPIDO DynDom	1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111122222222222222222 ******111111*******11111111111111111111111111111111111111111111111111111111111111111111111****** No dynamic domains were found
Hinge-ALL	++++++      +++++++                                                               ++      ++++++++++

	21        22        23        24        25        26        27        28        29        30 1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
1esg 2bam	RSIKKWKDKVEN RSIKKWK
DSSP	******
D2 code	*****
PB code	*****
dAngle-1 dAngle-2	***    *
Angle-ALL	+++
Core
FATCAT FlexProt RAPIDO DynDom	No dynamic domains were found
Hinge-ALL	+++++++

(4) Cluster 14

			No Sigificant Similarities	Z-Score: - AR: - RMSD: -A SI: -%
1ets L (len 36)	1ucy L (len 36)		DaliLite result

	1         2         3         4         5         6         7         8         9        10 1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
1ets 1ucy	TFGAGEADCGLRPLFEKKQVQDQTEKELFESYIEGR TFGAGEADCGLRPLFEKKQVQDQTEKELFESYIEGR
DSSP	*   * **     ***            ***
D2 code	*****   *         **      ****
PB code	N.A.
dAngle-1 dAngle-2	** *****                       * *  *** ***                        * *
Angle-ALL	++++++++                       + +
Core	0 0   0     0000
FATCAT FlexProt RAPIDO DynDom	11111111111111111111111111111111 11111111111111111111111111111111111         1111111111111111111111111    No dynamic domains were found
Hinge-ALL	++++++++                         +++

(5) Cluster 15

				Z-Score: 60.5 AR: 350 RMSD: 1.6A SI: 100%
1fdj A (len 363)	1fdj C (len 363)		DaliLite result

	1         2         3         4         5         6         7         8         9        10 1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
1fdA 1fdC	AHRFPALTPEQKKELSDIAQRIVANGKGILAADESVGTMGNRLQRIKVENSEENRRQFREILFTVDNSINQSIGGVILFHETLYQKDSQGKLFRNILKEK AHRFPALTPEQKKELSDIAQRIVANGKGILAADESVGTMGNRLQRIKVENSEENRRQFREILFTVDNSINQSIGGVILFHETLYQKDSQGKLFRNILKEK
DSSP	*****
D2 code	*
PB code	*                                             *          *
dAngle-1 dAngle-2
Angle-ALL
Core	0 0 000000000000000 0   000      000 000000 00000 0 0    000000  0   0000000  000 00     0000000
FATCAT FlexProt RAPIDO DynDom	1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 No dynamic domains were found
Hinge-ALL

	11        12        13        14        15        16        17        18        19        20 1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
1fdA 1fdC	GIVVGIKLDQGGAPLAGTNKETTIQGLDGLSERCAQYKKDGVDFGKWRAVLRIADQCPSSLAIQENANTLARYASICQQNGLVPIVEPEVIPDGDHDLEH GIVVGIKLDQGGAPLAGTNKETTIQGLDGLSERCAQYKKDGVDFGKWRAVLRIADQCPSSLAIQENANTLARYASICQQNGLVPIVEPEVIPDGDHDLEH
DSSP
D2 code	*     *               *                                                *  *
PB code	* *
dAngle-1 dAngle-2
Angle-ALL
Core	000 000   0   00 00   000000 00 00000000000    0000 00000000000 000000000000000000000000000000 0 000
FATCAT FlexProt RAPIDO DynDom	1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 No dynamic domains were found
Hinge-ALL

	21        22        23        24        25        26        27        28        29        30 1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
1fdA 1fdC	CQYVTEKVLAAVYKALNDHHVYLEGTLLKPNMVTAGHACTKKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFS CQYVTEKVLAAVYKALNDHHVYLEGTLLKPNMVTAGHACTKKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFS
DSSP	*                 **    *
D2 code	*                                 *                                           *
PB code	*                          *                     *** *      *
dAngle-1 dAngle-2
Angle-ALL
Core	00000000000000000000000000 0 000  0 0      0000000 0000 0 0000000 0 00  00  0000000000000  0000   0
FATCAT FlexProt RAPIDO DynDom	1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 No dynamic domains were found
Hinge-ALL

	31        32        33        34        35        36        37        38        39        40 1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
1a1q 1jxp	YGRALQASALAAWGGKAENKKATQEAFMKRAVVNCQAAKGQYVHTGSSGAASTQSLFTASYTY YGRALQASALAAWGGKAENKKATQEAFMKRAVVNCQAAKGQYVHTGSSGAASTQSLFTASYTY
DSSP	**  *  ****** *  *
D2 code	*       *  *                        *   * **********   *
PB code	***** ****** *****
dAngle-1 dAngle-2	* ****  ** *  *  **                                              ****  ****  *  **
Angle-ALL	+ ++++  ++++  +  ++
Core	0   0  0 0       0   00000000 0000000
FATCAT FlexProt RAPIDO DynDom	111111111111111111111111111111111111111111111 11111111111111111111111111111111111111111111111111111?????????? (ALT. POS. not supported) 11111111111111111111111111111111111111111111** No dynamic domains were found
Hinge-ALL	+++++++++++++++++++

[The D² codes]

• 0 = DDDDD    (Extended strand, small blue spheres)
• 1 = DDDDU
• 2 = DDDUD
• 3 = DDDUU
• 8 = DUDDD
• 9 = DUDDU
• A = DUDUD    (Helix, large red spheres)
• B = DUDUU    (C-cap, large orange spheres)
• G = UDDDD    (Large green spheres)
• H = UDDDU
• I = UDDUD
• J = UDDUU
• O = UUDDD
• P = UUDDU
• Q = UUDUD    (N-cap, large orange spheres)
• R = UUDUU    (Turn, large yellow spheres)

[The DSSP code]

• H = alpha helix
• B = residue in isolated beta-bridge
• E = extended strand, participates in beta ladder
• G = 3-helix (3/10 helix)
• I = 5 helix (pi helix)
• T = hydrogen bonded turn
• S = bend
• L = no assigned structure