• Backbone structures are obtained using ProteinViewer, where N-terminal is colored red and C-terminal blue.
• Click the images to view larger image.
• In the images of superimposition, the C-terminal of the first sequence is connected with the N-terminal of the second sequecne (because of the DaliLite output format).
• DSSP / D2 code / PB code: "*" indicates the position of the residues that assume different DSSP states / D2 codes / PB codes.
  
• dAngle-1: "*" indicates the position of the residues where the difference of the PHI angles or PSI angles between the two chains is more than or equal to 100°.  (dPHI=X or dPSI=X)
• dAngle-2: "*" indicates the position of the residues where the difference of the PHI angles and PSI angles between the two chains is more than or equal to 30°.  (dPHI>=3 and dPSI>=3)
• Angle-ALL: Union of "*" of dAngle-1 and "*" of  dAngle-2
• Core: "0" indicates the position of the residues where the difference of the PHI angles and PSI angles between the two chains is less than 10°.  (dPHI=0 and dPSI=0)
• FATCAT / FlexProt / RAPIDO / DynDom: "n" indicates the residues of the n-th rigid body. "*" indicates flexible regions. " " indicates not-aligned residues.
• Hinge-ALL: "*" indicates the position of the flexible or hinge regions identified by either FATCAT, FlexProt, RAPIDO, or DynDom. 

(1) Cluster 26

				Z-Score: 56.3 AR: 371 RMSD: 1.1A SI: 100%
1iyk A (len 392)	1nmt A (len 392)		DaliLite result

	1         2         3         4         5         6         7         8         9        10 1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
1iyk 1nmt	EGPIDKLKTPEDVPNDPLPLISDFEWSTLDIDDNLQLDELYKLLYDNYVEDIDATFRFKYSHEFFQWALKPPGWRKDWHVGVRVKSTGKLVAFIAATPVT EGPIDKLKTPEDVPNDPLPLISDFEWSTLDIDDNLQLDELYKLLYDNYVEDIDATFRFKYSHEFFQWALKPPGWRKDWHVGVRVKSTGKLVAFIAATPVT
DSSP	***                 **                        * ******
D2 code	* *              ***        *             **** ******           ***
PB code	*******          ** *                       ********
dAngle-1 dAngle-2	**              *                         *  ****                      *                          ******
Angle-ALL	++              +                         +++++++
Core	0       0  0  000  0  00   00000   0000000 0           0  0 0000000 0000000 00000 00 000000000 0000
FATCAT FlexProt RAPIDO DynDom	1111111111111111111112222222222222222222222222222222222222222222222222222222222222222222222222222222          1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 222222222222222222222111111111111111111111111111***  **********1111111111111111111111111111111111111 No dynamic domains were found
Hinge-ALL	+++++++++           ++                          +++++++++++++++

	11        12        13        14        15        16        17        18        19        20 1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
1iyk 1nmt	FKLNKSNKVIDSVEINFLCIHKKLRNKRLAPVLIKEITRRVNKQNIWQALYTGGSILPTPLTTCRYQHRPINWSKLHDVGFSHLPPNQTKSSMVASYTLP FKLNKSNKVIDSVEINFLCIHKKLRNKRLAPVLIKEITRRVNKQNIWQALYTGGSILPTPLTTCRYQHRPINWSKLHDVGFSHLPPNQTKSSMVASYTLP
DSSP	*              *          ** * *
D2 code	*       *      *      *** *                  *     ****             **             *          *
PB code	* ***      ****  *                    ********  ** *               *    ****
dAngle-1 dAngle-2	**                           **                              **                                                         *                             **
Angle-ALL	++                           +++                             ++
Core	00     0 00    0  00000    000000000    0000 0 0           0  000000000000    0   0    000  000 000
FATCAT FlexProt RAPIDO DynDom	2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1111111111111111111111111111**111111111111111111111111*** 111111111111111111111111111111111111111111 No dynamic domains were found
Hinge-ALL	++                        ++++

	21        22        23        24        25        26        27        28        29        30 1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
1iyk 1nmt	NNPKLKGLRPMTGKDVSTVLSLLYKYQERFDIVQLFTEEEFKHWMLGHDENSDSNVVKSYVVEDENGIITDYFSYYLLPFTVLDNAQHDELGIAYLFYYA NNPKLKGLRPMTGKDVSTVLSLLYKYQERFDIVQLFTEEEFKHWMLGHDENSDSNVVKSYVVEDENGIITDYFSYYLLPFTVLDNAQHDELGIAYLFYYA
DSSP	*                     ***                    **                               *
D2 code	*           *                    ****                               * *  *
PB code	*                * ******        ****               ****  *
dAngle-1 dAngle-2	*   **                             **                                                 *  **                             **
Angle-ALL	++  ++                             ++
Core	000000  00000  0000000000  0 000    0000000000       00  00000    0  000000000000          000000000
FATCAT FlexProt RAPIDO DynDom	2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111**111111111111111111111111111111******11111111111111 No dynamic domains were found
Hinge-ALL	++                              ++++++

	31        32        33        34        35        36        37        38        39        40 1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
1iyk 1nmt	SDSFEKPNYKKRLNELITDALITSKKFGVDVFNCLTCQDNTYFLKDCKFGSGDGFLNYYLFNYRTFPMDGGIDKKTKEVVEDQTSGIGVVLL SDSFEKPNYKKRLNELITDALITSKKFGVDVFNCLTCQDNTYFLKDCKFGSGDGFLNYYLFNYRTFPMDGGIDKKTKEVVEDQTSGIGVVLL
DSSP	****                                      ****               **                      **
D2 code	*                 *  *                          *
PB code	****           ****
dAngle-1 dAngle-2
Angle-ALL
Core	0  000 000000000000000000 000 0000 00000000000000 00  0000   000  0 00  0   000000  0 0000
FATCAT FlexProt RAPIDO DynDom	22222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 No dynamic domains were found
Hinge-ALL

(2) Cluster 27

				Z-Score: 33.8 AR: 208 RMSD: 1.0A SI: 98%
1iz1 A (len 292)	1iz1 B (len 294)		DaliLite result

	1         2         3         4         5         6         7         8         9        10 1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
1izA 1izB	MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRAAARGDVGELSVAYFGT MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRAAARGDVGELSVAYFGT
DSSP	*   *                     ****                               ** **
D2 code	**                            *    **                              *    **
PB code	****                     *    ****                            *** *
dAngle-1 dAngle-2	**                                                                                          **
Angle-ALL	+++
Core	000   0000000    0000   00 0000000000  0  0   0         0 00000 0000000000         0         0 0000
FATCAT FlexProt RAPIDO DynDom	1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111112222222222 1111111111111111111111111111111111111111111111111111111111111111111111111111111111112222222222222222 222222222222222222222222222222222222222222222222222222222222222222222222222222***********11111111111   11111111111111111111111111111111111111111111111111111111111111111111111111111************222222222
Hinge-ALL	++                                                                            +++++++++++++

	11        12        13        14        15        16        17        18        19        20 1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
1izA 1izB	PIYRSLPLLLRAFLTSTPTATVSLTHMTKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQEDLYLAVHRSQSGKFGKTCKLADLRAVELTLFPRGGRP PIYRSLPLLLRAFLTSTPTATVSLTHMTKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQEDLYLAVHRSQSGKFGKTCKLADLRAVELTLFPRGGRP
DSSP	*                                                  **
D2 code	*                        *           *                               *            **
PB code	*                                     ****** **
dAngle-1 dAngle-2	*                                                                                                 *
Angle-ALL	++
Core	000 0 00 0000   00  000  0000 000 000000000 000  0 00    0 00000 00  0  00     0000000  0000 0 0
FATCAT FlexProt RAPIDO DynDom	2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111***1 2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222
Hinge-ALL	***

	21        22        23        24        25        26        27        28        29        30 1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
1izA 1izB	SFADEVIGLFKHAGIEPRIARVVEDATAALALTMAGAASSIVPASVAAIRWPDIAFARIVGTRVKVPISCIFRKEKQPPILARFVEHVRRSA SFADEVIGLFKHAGIEPRIARVVEDATAALALTMAGAASSIVPASVAAIRWPDIAFARIVGTRVKVPISCIFRKEKQPPILARFVEHVRRSAKD
DSSP	*    *                             *                                           *
D2 code	*                               *                       *
PB code	***                 *                 ****                                 *
dAngle-1 dAngle-2
Angle-ALL
Core	0 000  0    0 0000   000000 000000 0   000000     000  000     0000  00    0 0 000
FATCAT FlexProt RAPIDO DynDom	22222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 22222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222
Hinge-ALL	++

(3) Cluster 28

				Z-Score: 15.1 AR: 104 RMSD: 0.9A SI: 100%
1k04 A (len 142)	1ow6 B (len 139)		DaliLite result

	1         2         3         4         5         6         7         8         9        10  1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
1k04 1ow6	EISPPPTANLDRSNDKVYENVTGLVKAVIEMSSKIQPAPPEEYVPMVKEVGLALRTLLATVDETIPLLPASTHREIEMAQKLLNSDLGELINKMKLAQQYV  ISPPPTANLDRSNDKVYENVTGLVKAVIEMSSKIQPAPPEEYVPMVKEVGLALRTLLATVDETIPLLPASTHREIEMAQKLLNSDLGELINKMKLAQQYV
DSSP	*                             ***  ***                    **     ***
D2 code	**                    *****  **                     *        *                           *
PB code	*                    ****                                                             **
dAngle-1 dAngle-2	**                                                               *                                           *
Angle-ALL	++     +                                                         +
Core	0 00 00    0 0000   0 000        0      000  00000  000000  0 00000         00  0 0      0 0
FATCAT FlexProt RAPIDO DynDom	1111111111111111111111111111111111 22222222222222222222222222222222222222222222222222222222222222222  1111111111111111111111111111111111XX22222222222222222222222222222233333333333333333333333333333333XX    22222222222222222222222222222222**  11111111111111111111111111111111111111111111111111111111111111    111111111111111111111111111111**********2222222222222222222222222222222222222222222222222222222222
Hinge-ALL	++                              ++++++++++                                                        ++

	11        12        13        14        15        16        17        18        19        20 1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
1k04 1ow6	MTSLQQEYKKQMLTAAHALAVDAKNLLDVIDQARLKMLGQT MTSLQQEYKKQMLTAAHALAVDAKNLLDVIDQARLKMLG
DSSP	**
D2 code	*  **
PB code	****                                *
dAngle-1 dAngle-2	* *
Angle-ALL	+
Core	0   0000  000  0000000 00 00 0 00
FATCAT FlexProt RAPIDO DynDom	222222222222222222222222222222222222222 X44444444444444444444444444444444444444 111111111111111111111111111111111111111 2222222222222222222222222222222222222
Hinge-ALL	+                                    ++

(4) Cluster 29

				Z-Score: 8.8 AR: 53 RMSD: 0.8A SI: 100%
1k50 A (len 63)	1k50 B (len 63)		DaliLite result

	1         2         3         4         5         6         7         8         9        10 1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
1k5A 1k5B	EEVTIKANLIFANGSTQTAEFKGTFEKATSEAYAYADTLKKDNGEWTADVADKGYTLNIKFAG EEVTIKANLIFANGSTQTAEFKGTFEKATSEAYAYADTLKKDNGEWTADVADKGYTLNIKFAG
DSSP	****************
D2 code	**       *******
PB code	*                                        *     ********   *
dAngle-1 dAngle-2	*****      *                                                  ******
Angle-ALL	++++++      +
Core	0  0000     0 00     000000000000000000   000             00
FATCAT FlexProt RAPIDO DynDom	11111111111111111111111111111111111111111111111111111 11111111111111111111111111111111111111111111111111111111 11111111111111111111111111111111111111111111111111*** No dynamic domains were found
Hinge-ALL	+++++++++++++

(5) Cluster 30

				Z-Score: 9.5 AR: 101 RMSD: 6.9A SI: 100%
1l5b A (len 101)	3ezm A (len 101)		DaliLite result

	1         2         3         4         5         6         7         8         9        10 12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901
1l5b 3ezm	LGKFSQTCYNSAIQGSVLTSTCERTNGGYNTSSIDLNSVIENVDGSLKWQPSNFIETCRNTQLAGSSELAAECKTRAQQFVSTKINLDDHIANIDGTLKYE LGKFSQTCYNSAIQGSVLTSTCERTNGGYNTSSIDLNSVIENVDGSLKWQPSNFIETCRNTQLAGSSELAAECKTRAQQFVSTKINLDDHIANIDGTLKYE
DSSP	*                 **                         * ****                                    ****
D2 code	**                 ** *        * *            **  **        *           *
PB code	*        *          ***** ******    *           *****      *    *  ****
dAngle-1 dAngle-2	**                       **                           *                        * *
Angle-ALL	++                       +++
Core	0 00   00  0 0   0 0     0      000    0     00          0              0  0000 0000    0    000
FATCAT FlexProt RAPIDO DynDom	11111111111111111111111111111111111111111111111111112222222222222222222222222222222222222222222222222 N.A. (Alt. pos. is not supported) 1111111111111111111111111111111111111111111111111111*222222222222222222222222222222222222222222222222   11111111111111111111111111111111111111111111111******22222222222222222222222222222222222222222222
Hinge-ALL	++                                               ++++++                                            ++

[The D² codes]

• 0 = DDDDD    (Extended strand, small blue spheres)
• 1 = DDDDU
• 2 = DDDUD
• 3 = DDDUU
• 8 = DUDDD
• 9 = DUDDU
• A = DUDUD    (Helix, large red spheres)
• B = DUDUU    (C-cap, large orange spheres)
• G = UDDDD    (Large green spheres)
• H = UDDDU
• I = UDDUD
• J = UDDUU
• O = UUDDD
• P = UUDDU
• Q = UUDUD    (N-cap, large orange spheres)
• R = UUDUU    (Turn, large yellow spheres)

[The DSSP code]

• H = alpha helix
• B = residue in isolated beta-bridge
• E = extended strand, participates in beta ladder
• G = 3-helix (3/10 helix)
• I = 5 helix (pi helix)
• T = hydrogen bonded turn
• S = bend
• L = no assigned structure