• Backbone structures are obtained using ProteinViewer, where N-terminal is colored red and C-terminal blue.
• Click the images to view larger image.
• In the images of superimposition, the C-terminal of the first sequence is connected with the N-terminal of the second sequecne (because of the DaliLite output format).
• Diff. of PHI/PSI angles: the sequence of dPHI (dPSI) is the difference of PHI (PSI, resp.) angles between the two amino acid chains.
  "0" indicates the difference is less than 10°, "1" indicates the difference belongs to [10°, 20°),  "2" indicates the difference belongs to [20°, 30°), and so on. "X" indicates the difference is more than or equal to 100°.
• Structural alignment: "1" indicates the first rigid body, "2" the second rigid body, "3" the third rigid body, and so on. "*" indicates  flexible regions. " " indicates not-aligned residues.

(1) Cluster 56

				Z-Score: 2.3 AR: 39 RMSD: 6.4A SI: 74%
2beq D (len 46)	2beq F (len 46)		DaliLite result

Amino Acid sequence	1         2         3         4         5        12345678901234567890123456789012345678901234567890 2beD   LGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQYIK 2beF   LGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQYIK
DSSP state sequence	1         2         3         4         5        12345678901234567890123456789012345678901234567890 2beD  "  S TT        HHHHHHHHHHHTTGGGGS  HHHHHHHHHHH " 2beF  "    TT        HHHHHHHHHHHHT       HHHHTTHHHHH "
D2 code sequence	1         2         3         4         5        12345678901234567890123456789012345678901234567890 2beD   --RHQBG000000RQAAAAAAAAAAAJQAABGR0QAAAAAAAAA-- 2beF   --0RQBG000000RQAAAAAAAAAAAB0RRG000QAAAABQAAA--
PB code sequence	1         2         3         4         5        12345678901234567890123456789012345678901234567890 2beD   ZZKLMPCCDDDDFKLMMMMMMMMMMMMMMMPCFKLMMMMMMMMMZZ 2beF   ZZFKLPCCDDDDFKLMMMMMMMMMMMPCFBBCDFKLMMMMMMMMZZ
Diff. of PHI/PSI angles	1         2         3         4         5        12345678901234567890123456789012345678901234567890 dPHI   -1X1000010010000000000000110300101100001100000 dPSI   11X001001010000000000000100XX0823900002400000-
FATCAT result	1         2         3         4         5        12345678901234567890123456789012345678901234567890 2beD   LGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQYIK        111111111111111111111111111111111 2beF   LGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQYIK
FlexProt result	1         2         3         4         5        12345678901234567890123456789012345678901234567890 2beD   LGDISGINASVVNIQKEI               DRLNEVAKNLNESLIDLQELGKYEQYIK          1111111111111111               222222222222222 2beF     LGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQYIK
RAPIDO result	1         2         3         4         5        12345678901234567890123456789012345678901234567890 2beD   LGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQYIK          111111111111111111111111111*        22222222 2beF   LGDISGINASVVNIQKEIDRLNEVAKNLNE     SLIDLQELGKYEQYIK
DynDom result	No dynamic domains were found
Molmov entry	2beq has no matches

(2) Cluster 57

				Z-Score: 21.2 AR: 131 RMSD: 12.3A SI: 94%
1bjm A (len 215)	1bjm B (len 215)		DaliLite result

Amino Acid sequence	1         2         3         4         5         6         7         8         9        10        1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890 1bjA   SVLTQPPSASGTPGQRVTISCSGSSSNIGENSVTWYQHLSGTAPKLLIYEDNSRASGVSDRFSASKSGTSASLAISGLQPEDETDYYCAAWDDSLDVAVF 1bjB   SVLTQPPSASGTPGQRVTISCSGSSSNIGENSVTWYQHLSGTAPKLLIYEDNSRASGVSDRFSASKSGTSASLAISGLQPEDETDYYCAAWDDSLDVAVF 1bjA   GTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTH 1bjB   GTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTH 1bjA   EGSTVEKTVAPTECS 1bjB   EGSTVEKTVAPTECS
DSSP state sequence	1         2         3         4         5         6         7         8         9        10        1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890 1bjA  "  BB  SEEEESTT EEEEEEE  TTTTTTS  EEEEE SSS   EEEETTTEE TT  TTEEEEE SSEEEEEEET  GGG SEEEEEEE SSTT EEE" 1bjB  "  BB  SEEEE TT EEEEEEE  IIIIITS EEEEEE TTT  EEEEETTTEE TT  TTEEEEEETTEEEEEEES  GGG SEEEEEEEETTTTEEEE" 1bjA  "B  EEEEE SS  B  EEEEE   HHHHHTT EEEEEEEEEEBSS  EEEEEESSSEE TTEEE   EE TTSSEEEEEEEEE HHHHHTSS EEEEEEE" 1bjB  "B  EEEEE S   B  EEEEE   STTTTTT EEEEEEEEEEBSS  EEEEEETTEE  SSEEE   EE TTS EEEEEEEEE HHHHHH S EEEEEEE" 1bjA  "TTEEEEEEE   TT " 1bjB  "TTEEEEEEE S    "
D2 code sequence	1         2         3         4         5         6         7         8         9        10        1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890 1bjA   --0000R000000R0000000000QG0QB0G00000000RG00000R00RR00000R00QBG000000R00000RQ000QABRG00000000R00R0000 1bjB   --0000R000000RG000000000QB0QB000000000O01G0000300RR00000RG0QBG000000RG000000R00QABRG00000000QABRG000 1bjA   0R0000000R00000000000000QAAAABOG00000000R00O0G0000000RRG00RG0000000000QBRG0000000000QAAAABGR00000000 1bjB   0R0000000000000000000000QAAAABRG00000000R00O000000000RRG0RRGR000000000QBRG0000000000QAAAABGR00000000 1bjA   RRG00000000R0-- 1bjB   RRG0000000000--
PB code sequence	1         2         3         4         5         6         7         8         9        10        1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890 1bjA   ZZPCDFBDCFBGOIACDDDDDFKLMMMNOMLACDDDDDFBEHFBLCBGGHLACCEHIAFKBCCDDEHJACCDDDEHIAFKLMCCDDDDDEHJAGHIADDD 1bjB   ZZCDDFBDCDDEHKLACDDDDFKLMMMMMPCCDDDDDDEHJOPADFBGGHIACCEHIAFKBCCDDEHJACCDDDEHIAFKLPMBCCDDDDDFKLOPADDD 1bjA   EHIADDDDFBDCDDDDDDDDDDDFKLMMNOPACDDDDDEHIADDBDDDDDDEEHIACFEHPACDDDDDDFKLPACDDDDDDDDFKLMMMPFBDCDDDDEE 1bjB   EHIADDDEHIADDDDDDDDDDDDFKLMMNOPACDDDDDEHIAFJLCCDDDDEEHIACFEHIACDDDDDDFKLPACDDDDDDFBLMLMMMPCBDCDDDDEE 1bjA   HIACDDDDDDFEHZZ 1bjB   HIACDDDDDEHEHZZ
Diff. of PHI/PSI angles	1         2         3         4         5         6         7         8         9        10        1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890 dPHI   -0510000120000021011010325012X0322000001X61440200000032010011111103222220102602011012001079X14103002 dPSI   X200000012310100001101106010X03011001115XX341100100220330120301103514310002500010012100023361XX01020 dPHI   100011102X823201000020110231260010100101020001011001001501192301111001020011010000000501031430200000 dPSI   0000001127301110000000202210600101100110200000020001107100803021100030311100011000001210411130010003 dPHI   02300000212XX68 dPSI   15010000010X1X-
FATCAT result	1         2         3         4         5         6         7         8         9        10        1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890 1bjA   SVLTQPPSASGTPGQRVTISCSGSSSNIGENSVTWYQHLSGTAPKLLIYEDNSRASGVSDRFSASKSGTSASLAISGLQPEDETDYYCAAWDDSLDVAVF        1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1bjB   SVLTQPPSASGTPGQRVTISCSGSSSNIGENSVTWYQHLSGTAPKLLIYEDNSRASGVSDRFSASKSGTSASLAISGLQPEDETDYYCAAWDDSLDVAVF 1bjA   GTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTH        1111111112222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 1bjB   GTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTH 1bjA   EGSTVEKTVAPTECS        222222222222 1bjB   EGSTVEKTVAPTECS
FlexProt result	1         2         3         4         5         6         7         8         9        10        1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890 1bjA   SVLTQPPSASGTPGQRVTISCSGSSSNIGENSVTWYQHLSGTAPKLLIYEDNSRASGVSDRFSASKSGTSASLAISGLQPEDETDYYCAAWDDSLDVAVF        1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1bjB   SVLTQPPSASGTPGQRVTISCSGSSSNIGENSVTWYQHLSGTAPKLLIYEDNSRASGVSDRFSASKSGTSASLAISGLQPEDETDYYCAAWDDSLDVAVF 1bjA   GTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTH        1111111112222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 1bjB   GTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTH 1bjA   EGSTVEKTVAPTECS        222222222222222 1bjB   EGSTVEKTVAPTECS
RAPIDO result	1         2         3         4         5         6         7         8         9        10        1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890 1bjA   SVLTQPPSASGTPGQRVTISCSGSSSNIGENSVTWYQHLSGTAPKLLIYEDNSRASGVSDRFSASKSGTSASLAISGLQPEDETDYYCAAWDDSLDVAVF         222222222222222222222222222222222222222**2222222222222222222222222222222222222222222222222*******22 1bjB   SVLTQPPSASGTPGQRVTISCSGSSSNIGENSVTWYQHLSGTAPKLLIYEDNSRASGVSDRFSASKSGTSASLAISGLQPEDETDYYCAAWDDSLDVAVF 1bjA   GTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTH        222222222*111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1bjB   GTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTH 1bjA   EGSTVEKTVAPTECS        111111111111** 1bjB   EGSTVEKTVAPTECS
DynDom result	1         2         3         4         5         6         7         8         9        10        1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890 1bjA   SVLTQPPSASGTPGQRVTISCSGSSSNIGENSVTWYQHLSGTAPKLLIYEDNSRASGVSDRFSASKSGTSASLAISGLQPEDETDYYCAAWDDSLDVAVF          11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1bjB   SVLTQPPSASGTPGQRVTISCSGSSSNIGENSVTWYQHLSGTAPKLLIYEDNSRASGVSDRFSASKSGTSASLAISGLQPEDETDYYCAAWDDSLDVAVF 1bjA   GTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTH        11111111**222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 1bjB   GTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTH 1bjA   EGSTVEKTVAPTECS        2222222222222 1bjB   EGSTVEKTVAPTECS
Molmov entry	This pair is not registered

(3) Cluster 58

				Z-Score: 22.7 AR: 212 RMSD: 9.4A SI: 99%
1jvk A (len 215)	1jvk B (len 214)		DaliLite result

Amino Acid sequence	1         2         3         4         5         6         7         8         9        10        1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890 1jvA   TALTQPASVSGSPGQSITVSCTGVSSIVGSYNLVSWYQQHPGKAPKLLTYEVNKRPSGVSDRFSGSKSGNSASLTISGLQAEDEADYYCSSYDGSSTSVV 1jvB   TALTQPASVSGSPGQSITVSCTGVSSIVGSYNLVSWYQQHPGKAPKLLTYEVNKRPSGVSDRFSGSKSGNSASLTISGLQAEDEADYYCSSYDGSSTSVV 1jvA   FGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVT 1jvB   FGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVT 1jvA   HEGSTVEKTVAPTAC 1jvB   HEGSTVEKTVAPTA
DSSP state sequence	1         2         3         4         5         6         7         8         9        10        1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890 1jvA  "  BB  SEEEE TT EEEEEEE    SSTT   EEEEEE TTS  EEEEBTTTB  TTS TTEEEEEETTEEEEEEES  GGG EEEEEEES SSSS  E" 1jvB  "   B  SEEEE TT  EEEEEE TTTSTT TT EEEEEE TTS  EEEEBTTTB  TT  TTEEEEEETTEEEEEE S  GGG EEEEEEEEETTTTEEE" 1jvA  "EB  EEEEE     B  EEEEE   HHHHHTT EEEEEEEEEEBSS  EEEEEETTEE  SSEEE   EE TTS EEEEEEEEE HHHHHTSS EEEEEE" 1jvB  "E   EEEEE SS  B  EEEEE   HHHHHTT EEEEEEEEEEBSS  EEEEESSSSEE SSEEE   EE TTSSEEEEEEEEE HHHHHH S EEEEEE" 1jvA  "ETTEEEEEEE     " 1jvB  "ETTEEEEEEE S  "
D2 code sequence	1         2         3         4         5         6         7         8         9        10        1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890 1jvA   --0000R000000RG0000001RR00O0000RO00000000RG0000300RR00000RG0QBG000000RG000000R00QABRG000000000ABR000 1jvB   --G000R000000RG0000001OQABG0RR0RR00000000RG0000001RR00000R00QBG000000RG000000R00QABGG00000000QBBRG00 1jvA   00R0000001R00000000000000QAAAABRG00000000R00O3G000000RRRG0000R000000000QBRG0000000000QAAAABGR0000000 1jvB   00R00000R0R00000000000000QAAAABRG00000000R00ORG00000000RG0000R000000000QBRG0000000000QAAAABGR0000000 1jvA   0RRG000000000-- 1jvB   0RRG00000000--
PB code sequence	1         2         3         4         5         6         7         8         9        10        1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890 1jvA   ZZDDDFBDCDDEHKLACDDDEHKACFBLJACBDCDDDDDEHIACDDFBGEHIACCEHIACKBCCDDEHJACCDDDEHIAFKLGOPADDDEHEHLMNOPAC 1jvB   ZZACDFBDCDDEHIACDDDDEHJLMPGHKLMMCCCDDDDEHIACDDFBGGHLACCEHIACKBCCDDEHJACCDDDEHIAFKLPCCDDDDDDDFKLOPACD 1jvA   DEHIADDDEHIACDDDDDDDDDDDFKLMMNOPACDDDDDEHIACDBDDDDDDEHJACCFEHIACDDDDDFKLOPACDDDDDDDDFKLMMMPFBDCDDDDE 1jvB   DEHIADDDDFBDCDDDDDDDDDDDFKLMMNOPACDDDDDEHIACFBDCDDDDFKLMCCEHHIACDDDDDFKLOPACDDDDDDDDFKLMMMPCBDCDDDDE 1jvA   EHIACDDDDDDDFZZ 1jvB   EHIACDDDDDDEZZ
Diff. of PHI/PSI angles	1         2         3         4         5         6         7         8         9        10        1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890 dPHI   -85310100111011211023011201107X110000010000001002000201014010000000001000001010000000001100X6X15X510 dPSI   1X1100100010000111112010XXX1X982100000000101110100011112300000100000100000101001000000010102X307X300 dPHI   0000010013X9002000000000000002010040000000000011000003X100332000100000000010000001010010013110000000 dPSI   01000100051102000000000000012111050000000000001000001X4121161002000010000000000000010100022022000000 dPHI   1001000001019X dPSI   0011000010122-
FATCAT result	1         2         3         4         5         6         7         8         9        10        1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890 1jvA   TALTQPASVSGSPGQSITVSCTGVSSIVGSYNLVSWYQQHPGKAPKLLTYEVNKRPSGVSDRFSGSKSGNSASLTISGLQAEDEADYYCSSYDGSSTSVV        1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1jvB   TALTQPASVSGSPGQSITVSCTGVSSIVGSYNLVSWYQQHPGKAPKLLTYEVNKRPSGVSDRFSGSKSGNSASLTISGLQAEDEADYYCSSYDGSSTSVV 1jvA   FGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVT        1111111111112222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 1jvB   FGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVT 1jvA   HEGSTVEKTVAPTAC        22222222222222 1jvB   HEGSTVEKTVAPTA
FlexProt result	1         2         3         4         5         6         7         8         9        10        1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890 1jvA   TALTQPASVSGSPGQSITVSCTGVSSIVGSYNLVSWYQQHPGKAPKLLTYEVNKRPSGVSDRFSGSKSGNSASLTISGLQAEDEADYYCSSYDGSSTSVV        1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1jvB   TALTQPASVSGSPGQSITVSCTGVSSIVGSYNLVSWYQQHPGKAPKLLTYEVNKRPSGVSDRFSGSKSGNSASLTISGLQAEDEADYYCSSYDGSSTSVV 1jvA   FGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVT        1111111112222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 1jvB   FGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVT 1jvA   HEGSTVEKTVAPTAC        22222222222222 1jvB   HEGSTVEKTVAPTA
RAPIDO result	1         2         3         4         5         6         7         8         9        10        1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890 1jvA   TALTQPASVSGSPGQSITVSCTGVSSIVGSYNLVSWYQQHPGKAPKLLTYEVNKRPSGVSDRFSGSKSGNSASLTISGLQAEDEADYYCSSYDGSSTSVV          2222222222222222222222**    22222222222222222222222222222222222222222222222222222222222222******22 1jvB   TALTQPASVSGSPGQSITVSCTGVSSIVGSYNLVSWYQQHPGKAPKLLTYEVNKRPSGVSDRFSGSKSGNSASLTISGLQAEDEADYYCSSYDGSSTSVV 1jvA   FGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVT        2222222222*11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1jvB   FGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVT 1jvA   HEGSTVEKTVAPTAC        1111111111111* 1jvB   HEGSTVEKTVAPTA
DynDom result	1         2         3         4         5         6         7         8         9        10        1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890 1jvA   TALTQPASVSGSPGQSITVSCTGVSSIVGSYNLVSWYQQHPGKAPKLLTYEVNKRPSGVSDRFSGSKSGNSASLTISGLQAEDEADYYCSSYDGSSTSVV          11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1jvB   TALTQPASVSGSPGQSITVSCTGVSSIVGSYNLVSWYQQHPGKAPKLLTYEVNKRPSGVSDRFSGSKSGNSASLTISGLQAEDEADYYCSSYDGSSTSVV 1jvA   FGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVT        11111111******22222222222222222222222222222222222222222222222222222222222222222222222222222222222222 1jvB   FGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVT 1jvA   HEGSTVEKTVAPTAC        222222222222 1jvB   HEGSTVEKTVAPTA
Molmov entry	1jvk has no matches

(4) Cluster 59

				Z-Score: 26.2 AR: 143 RMSD: 1.1A SI: 100%
1sk4 A (len 162)	1twq A (len 165)		DaliLite result

Amino Acid sequence	1         2         3         4         5         6         7         8         9        10        1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890 1sk4   PNIIKRSAWEARETHCPKMNLPAKYVIIIHTAGTSCTVSTDCQTVVRNIQSFHMDTRNFCDIGYHFLVGQDGGVYEGVGWHIQGSHTYGFNDIALGIAFI 1twq VCPNIIKRSAWEARETHCPKMNLPAKYVIIIHTAGTSCTVSTDCQTVVRNIQSFHMDTRNFCDIGYHFLVGQDGGVYEGVGWHIQGSHTYGFNDIALGIAFI 1sk4   GYFVEKPPNAAALEAAQDLIQCAVVEGYLTPNYLLMGHSDVVNILSPGQALYNIISTWPHFKH 1twq   GYFVEKPPNAAALEAAQDLIQCAVVEGYLTPNYLLMGHSDVVNILSPGQALYNIISTWPHFKH
DSSP state sequence	1         2         3         4         5         6         7         8         9        10        1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890 1sk4  "   B GGGGT       B  SSEEEEEEEE  S   SSHHHHHHHHHHHHHHHHHTS  SS S SEEE TTS EEESS TTB   SSTT TTTEEEEEES" 1twq"     B GGGGT       B  SSEEEEEEEE  S   SSHHHHHHHHHHHHHHHHHTS  SS S SEEE TTS EEESS TTB   SSTTTTTTEEEEEES" 1sk4  "S  SSS   HHHHHHHHHHHHHHHHTTSEEEEEEEEEGGGSTTS  TTSHHHHHHTTSTTTT " 1twq  "S  SSS   HHHHHHHHHHHHHHHHHTSEEEEEEEEEHHHHSS   S HHHHHHHTTSTTB  "
D2 code sequence	1         2         3         4         5         6         7         8         9        10        1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890 1sk4   --000QAABR00000000000O0R000000RRG0000GQAAAAAAAAAAAAAAGB0BR0R00RGR0000QBR00000R0QGG00RG00QHQA0G000000 1twq --0O000QAABR00000000000O0R000000RRG00000QAAAAAAAAAAAAAAG01BR0R00RGR0000QBR00000R0QGG00RG00QHQB0G000000 1sk4   001QB0000QAAAAAAAAAAAAAAABRR00QB00000QABGQBG000R0QAAAAAABG0R0-- 1twq   001R00000QAAAAAAAAAAAAAAABRRG0QB00000QAB00R0R0O0QAAAAAAABG0R0--
PB code sequence	1         2         3         4         5         6         7         8         9        10        1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890 1sk4   ZZDDFKLNOPACDDDDDDDDDDFBDCDDDEHLMMBLCFKLMMMMMMMMMMMMMMMNOPAKLMCFBDCDFKLPACDFKLMMPCFBLMGHILMMCCCDDDEH 1twq ZZGKIAFKLNOPACDDDDDDDDDDFBDCDDDEHLBMBLCFKLMMMMMMMMMMMMMMMNOPAKBMCFBDCDFKLPACDFKLMMPCCDFBGHILMMCCCDDDEH 1sk4   JAMKBCCDFKLMMMMMMMMMMMMMNOPACFKBCCDDFKLPMKLCCEHIAKLMMMMMPGHIAZZ 1twq   JAMKBCCDFKLMMMMMMMMMMMMMNOPACFKBCCDDFKLMPCCDDEHFKLMMMMMMPGHIAZZ
Diff. of PHI/PSI angles	1         2         3         4         5         6         7         8         9        10        1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890 dPHI   -3X0000000001000000000001000000000000000000000000000000010001000000000010000000000000000110000000000 dPSI   2X31000000000010000100000000000000001000000000000000010100010000000001000000000000000020000010000000 dPHI   0001020000000000000000001110000101000011370431402000000000000XX dPSI   0010110000000000000000000100000001000101XXX342XXX0000101010023-
FATCAT result	1         2         3         4         5         6         7         8         9        10        1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890 1sk4   PNIIKRSAWEARETHCPKMNLPAKYVIIIHTAGTSCTVSTDCQTVVRNIQSFHMDTRNFCDIGYHFLVGQDGGVYEGVGWHIQGSHTYGFNDIALGIAFI        1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1twq VCPNIIKRSAWEARETHCPKMNLPAKYVIIIHTAGTSCTVSTDCQTVVRNIQSFHMDTRNFCDIGYHFLVGQDGGVYEGVGWHIQGSHTYGFNDIALGIAFI 1sk4   GYFVEKPPNAAALEAAQDLIQCAVVEGYLTPNYLLMGHSDVVNILSPGQALYNIISTWPHFKH        11111111111111111111111111111111111111111     22222222222222222 1twq   GYFVEKPPNAAALEAAQDLIQCAVVEGYLTPNYLLMGHSDVVNILSPGQALYNIISTWPHFKH
FlexProt result	1         2         3         4         5         6         7         8         9        10        1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890 1sk4   PNIIKRSAWEARETHCPKMNLPAKYVIIIHTAGTSCTVSTDCQTVVRNIQSFHMDTRNFCDIGYHFLVGQDGGVYEGVGWHIQGSHTYGFNDIALGIAFI        1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1twq VCPNIIKRSAWEARETHCPKMNLPAKYVIIIHTAGTSCTVSTDCQTVVRNIQSFHMDTRNFCDIGYHFLVGQDGGVYEGVGWHIQGSHTYGFNDIALGIAFI 1sk4   GYFVEKPPNAAALEAAQDLIQCAVVEGYLTPNYLLMGHSDVVNILSPGQALYNIISTWPHFKH        111111111111111111111111111111111111111111111122222222222222222 1twq   GYFVEKPPNAAALEAAQDLIQCAVVEGYLTPNYLLMGHSDVVNILSPGQALYNIISTWPHFKH
RAPIDO result	1         2         3         4         5         6         7         8         9        10        1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890 1sk4   PNIIKRSAWEARETHCPKMNLPAKYVIIIHTAGTSCTVSTDCQTVVRNIQSFHMDTRNFCDIGYHFLVGQDGGVYEGVGWHIQGSHTYGFNDIALGIAFI        1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1twq VCPNIIKRSAWEARETHCPKMNLPAKYVIIIHTAGTSCTVSTDCQTVVRNIQSFHMDTRNFCDIGYHFLVGQDGGVYEGVGWHIQGSHTYGFNDIALGIAFI 1sk4   GYFVEKPPNAAALEAAQDLIQCAVVEGYLTPNYLLMGHSDVVNILSPGQALYNIISTWPHFKH        11111111111111111111111111111111111111111**   ***************** 1twq   GYFVEKPPNAAALEAAQDLIQCAVVEGYLTPNYLLMGHSDVVNILSPGQALYNIISTWPHFKH
DynDom result	No dynamic domains were found
Molmov entry	Both 1sk4 and 1twq have no matches

(5) Cluster 60

				Z-Score: 19.6 AR: 164 RMSD: 11.2A SI: 67%
2mcg 1 (len 215)	2mcg 2 (len 215)		DaliLite result

Amino Acid sequence	1         2         3         4         5         6         7         8         9        10        1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890 2mc1   SALTQPPSASGSLGQSVTISCTGTSSDVGGYNYVSWYQQHAGKAPKVIIYEVNKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYEGSDNFVF 2mc2   SALTQPPSASGSLGQSVTISCTGTSSDVGGYNYVSWYQQHAGKAPKVIIYEVNKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYEGSDNFVF 2mc1   GTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTH 2mc2   GTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTH 2mc1   EGSTVEKTVAPTECS 2mc2   EGSTVEKTVAPTECS
DSSP state sequence	1         2         3         4         5         6         7         8         9        10        1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890 2mc1  "   B  S EEE SS  EEEEEE  TTTTTTT   EEEEE TTS     BBTTTB  SSS TT  EEESSSEEEEEESS  GGG EEEEEEEE SSS EEE" 2mc2  "   B  S  B  SS   EEEEE BTTTBSSSS EEEE   SSS   B  BTTTB  TTS TTEEEEE SSEEEEEE S  SS  S  EEEEE SSS EE " 2mc1  "   EEEEE SS      EEEE   HHHHHTT  EEEEEEEEESSS  EEEEEETTEEE SSEEEEEEEE TTS EEEEEEEE  HHHHHHSS EEEEEE " 2mc2  "      B           EEE   HHHHHTT  EEEEEEEEESS    EEEEETTEEE SS  B   EE SSS EEEEEEEE  HHHHHHSS EEEEEEE" 2mc1  "SS EEEEEE      " 2mc2  "TTEEEEEEE S S  "
D2 code sequence	1         2         3         4         5         6         7         8         9        10        1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890 2mc1   --00000000000BG0000000001R1RQABRG00000000RG0000000R0R00R1RG01RG0000R0RG000000R00QABGG00000000RQBG000 2mc2   --0000R00000000000000000Q801AB0R0000000R0RG0R00R00R0R0000000RG0000000RG000000R00QABRG0000000300RG000 2mc1   0300000R0R00000000000000QAAAABRG00000000000RRG0000000RRG003G0000000000QBRG0000000000QAAAAGGR00000000 2mc2   000000001R000000R0000000QAAAABRG00000000R01RRG0000000R0G00RGR000000000RGRG0000000000QAAAABGR000R0000 2mc1   0RG000000000R-- 2mc2   RRG0000000RG0--
PB code sequence	1         2         3         4         5         6         7         8         9        10        1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890 2mc1   ZZACDEHIADEEHPACDDDDDFBLNOPAMLONOPADDDEFJACCFBLCGEHIACEHLACCKBCCDDEHJACCDDDEHIAFKLGHJACDDDDFKLNOPADD 2mc2   ZZCDDEHIADDEHEBPADDDDFBLMGOPAMMMCCDDFKLOPMBNOPGHIAHIACCEHIAFKBCCDDFKLPCCDDDEHIEHLAPMBLCDDDDEEHIIACDD 2mc1   EHIADDDDFKBPCDDDDDDDFBACKLMMNOPACDDDDDEHIFBLCDDDDDDEEHIACFKLCCCDDDDDFKLOPACDDDDDDFBLMLMMMPMBDCDDDDEE 2mc2   FKLOMBAGHIACDDDDDDDDDDDFKLMMNONOPADDDDEHIFBLCNOPADDEEHIACFEHIACFBACDEHJLPCFBACDDDDDFKLMMMPMBDCDDDDEE 2mc1   HIACDDDDDDDFEZZ 2mc2   HIACDDDDDDDEHZZ
Diff. of PHI/PSI angles	1         2         3         4         5         6         7         8         9        10        1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890 dPHI   -760031X4405X88X40100422556XX88X2X2120X3XX700X1260010016XX5451201131941120023104X101202003064X2X5503 dPSI   X9302092411X5XX11100140667XX90X4X1022X4XX230X6172111105XX6412210122872012104011X100100001022X8947243 dPHI   03X3X0319X80224024021001310013315101102003202278102103161026X092472204X5X314441201010221014110110002 dPSI   3X5X2623334014022012021421013307101200013040244120203141102X091370012X7X5022303000211200011002011003 dPHI   177180010031XXX dPSI   8504102012941X-
FATCAT result	1         2         3         4         5         6         7         8         9        10        1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890 2mc1   SALTQPPSASGSLGQSVTISCTGTSSDVGGYNYVSWYQQHAGKAPKVIIYEVNKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYEGSDNFVF        1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 2mc2   SALTQPPSASGSLGQSVTISCTGTSSDVGGYNYVSWYQQHAGKAPKVIIYEVNKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYEGSDNFVF 2mc1   GTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTH        1111111111222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 2mc2   GTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTH 2mc1   EGSTVEKTVAPTECS        222222222222 2 2mc2   EGSTVEKTVAPTECS
FlexProt result	1         2         3         4         5         6         7         8         9        10        1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890 2mc1   SALTQPPSASGSLGQSVTISCTGTSSDVGGYNYVSWYQQHAGKAPKVIIYEVNKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYEGSDNFVF        1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 2mc2   SALTQPPSASGSLGQSVTISCTGTSSDVGGYNYVSWYQQHAGKAPKVIIYEVNKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYEGSDNFVF 2mc1   GTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTH        1111111122222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 2mc2   GTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTH 2mc1   EGSTVEKTVAPTECS        222222222222222 2mc2   EGSTVEKTVAPTECS
RAPIDO result	1         2         3         4         5         6         7         8         9        10        1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890 2mc1   SALTQPPSASGSLGQSVTISCTGTSSDVGG YNYVSWYQQHAGKAPKVIIYEVNKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYEGSDNFVF          22222222222222222222*** **** *2222222222222222222222222222222222222222222222222222222222222******22 2mc2   SALTQPPSASGSLGQSVTISCTGTS SDVGGYNYVSWYQQHAGKAPKVIIYEVNKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYEGSDNFVF 2mc1   GTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTH        22222222**111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 2mc2   GTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTH 2mc1   EGSTVEKTVAPTECS        11111111111*** 2mc2   EGSTVEKTVAPTECS
DynDom result	1         2         3         4         5         6         7         8         9        10        1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890 2mc1   SALTQPPSASGSLGQSVTISCTGTSSDVGGYNYVSWYQQHAGKAPKVIIYEVNKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYEGSDNFVF          11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 2mc2   SALTQPPSASGSLGQSVTISCTGTSSDVGGYNYVSWYQQHAGKAPKVIIYEVNKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYEGSDNFVF 2mc1   GTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTH        1111111*****2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 2mc2   GTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTH 2mc1   EGSTVEKTVAPTECS        222222222222222 2mc2   EGSTVEKTVAPTECS
Molmov entry	This pair is not regostered

[The D² codes]

• 0 = DDDDD    (Extended strand, small blue spheres)
• 1 = DDDDU
• 2 = DDDUD
• 3 = DDDUU
• 8 = DUDDD
• 9 = DUDDU
• A = DUDUD    (Helix, large red spheres)
• B = DUDUU    (C-cap, large orange spheres)
• G = UDDDD    (Large green spheres)
• H = UDDDU
• I = UDDUD
• J = UDDUU
• O = UUDDD
• P = UUDDU
• Q = UUDUD    (N-cap, large orange spheres)
• R = UUDUU    (Turn, large yellow spheres)

[The DSSP code]

• H = alpha helix
• B = residue in isolated beta-bridge
• E = extended strand, participates in beta ladder
• G = 3-helix (3/10 helix)
• I = 5 helix (pi helix)
• T = hydrogen bonded turn
• S = bend
• L = no assigned structure