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[5-tile codes of folded tetrahedron sequences (Code length 7)]

The following table shows the frequency of occurrences of 5-tile codes in all the folded tetrahedron sequences
(of length 21 in the case of code width 3 and length 35 in the case of code width 5).
Folded tetrahedron sequences are genarated by program TetraSeqGen as follows:
In particular, "translation" is allowed during the folding process.  And two tetrahedron types, 0[xzy] and 0[zxy], are considered as the initial tetrahedron for each U/D-valued sequence. That is, two folded tetrahedron sequences are computed for each U/D sequence.

Remarks: NOTE: Firstly, ("protein backbone") fragments of length seven are generated by program TetraSeqGen. Then, each fragment is encoded  into the 5-tile code sequence by program ProteinEncoder. In the case of code width 3 (or 5), one should feed TetraSeqGen a binary sequence of length 21 (or 35). (Added on 2011/12/12)


5-tile
code
Code width 3 (DDX-...)
Occur. Examples
Code width 5 (DDDXX-...)
Occur. Examples
ASTRAL
Occur.

000
AAA
00R
R00
QAA
00Q
0R0
AAB
0QA
G00
2172

(0.83%)
jpg image jpg image
1

(0.00%)
jpg image -
277

(0.11%)
jpg image jpg image
1122

(0.43%)
jpg image jpg image
7

(0.00%)
jpg image jpg image
119

(0.05%)
jpg image jpg image
428

(0.16%)
jpg image jpg image
0

(0.00%)
-
-
24

(0.01%)
jpg image jpg image
425

(0.16%)
jpg image jpg image
1169903

(0.11%)
jpg image jpg image
2486

(0.00%)
jpg image jpg image
22090

(0.00%)
jpg image jpg image
533528

(0.05%)
jpg image jpg image
10877

(0.00%)
jpg image jpg image
229503

(0.02%)
jpg image jpg image
22095

(0.00%)
jpg image jpg image
400

(0.00%)
jpg image jpg image
50159

(0.00%)
jpg image jpg image
160340

(0.01%)
jpg image jpg image
490242

(22.8%)
468792

(21.8%)
84590

(3.9%)
74211

(3.4%)
63581

(3.0%)
59791

(2.8%)
57883

(2.7%)
55758

(2.6%)
54861

(2.5%)
53163

(2.5%)
RG0
0RG
0QB
BG0
AB0
B00
ABG
ABR
QAB
0RR
626

(0.24%)
jpg image jpg image
228

(0.09%)
jpg image jpg image
120

(0.05%)
jpg image jpg image
79

(0.03%)
jpg image jpg image
25

(0.01%)
jpg image jpg image
282

(0.11%)
jpg image jpg image
10

(0.00%)
jpg image jpg image
4

(0.00%)
jpg image jpg image
0

(0.00%)
-
-
0

(0.00%)
-
-
180579

(0.02%)
jpg image jpg image
9720

(0.00%)
jpg image jpg image
8645

(0.00%)
jpg image jpg image
31320

(0.00%)
jpg image jpg image
1409

(0.00%)
jpg image jpg image
92964

(0.01%)
jpg image jpg image
555

(0.00%)
jpg image jpg image
0

(0.00%)
-
-
1700

(0.00%)
jpg image jpg image
130

(0.00%)
jpg image jpg image
38221

(1.8%)
29289

(1.4%)
28320

(1.3%)
23579

(1.1%)
22565

(1.0%)
22164

(1.0%)
21350

(1.0%)
21021

(1.0%)
19548

(0.9%)
17812

(0.8%)
Else
256195

(97.73%)
-
-
1071213421

(99.76%)
-
-
446662

(20.74%)

Total
262144

(100.0%)
-
-
1073741824

(100.0%)
-
-
2153403

(100.0%)



*5-tile code to U/D-valued sequence correspondence:

Code U/D seq.
0 DDDDD
1 DDDDU
2 DDDUD
3 DDDUU
4 DDUDD
5 DDUDU
6 DDUUD
7 DDUUU
8 DUDDD
Code U/D seq.
9 DUDDU
A DUDUD
B DUDUU
C DUUDD
D DUUDU
E DUUUD
F DUUUU
G UDDDD
H UDDDU
Code U/D seq.
I UDDUD
J UDDUU
K UDUDD
L UDUDU
M UDUUD
N UDUUU
O UUDDD
P UUDDU
Q UUDUD
Code U/D seq.
R UUDUU
S UUUDD
T UUUDU
U UUUUD
V UUUUU