2-Layer Sandwich (3.30) -1

[2-Layer Sandwich (3.30) -1]

|LCS| denotes the length of the longest common subsequence.
|Key Seq.| denotes the length of the key sequence.
(Upon length counting, residues without 5-tile code are omitted, such as two residues at both ends.)
In the images of superimposition, the C-terminal of the key sequence is connected with the N-terminal of a target sequecne
(because of the DaliLite output format).
Click the images to view larger image.
Click the filenames to view the corresponding PDB file
Click "LCS" to view the longest common subsequence

Key sequence	ASTRAL dataset search by ComSubstruct		Pairwise Comparison by DALI
	Frequency table of the ratio of seq. lengths Execution time	[Best result] \|LCS\|/\|Key Seq.\| value	Superimpos.	Z-score
		Length of the LCS		Num. of aligned residues
		[2nd best] \|LCS\|/\|Key Seq.\| value		RMSD of CAs
		Length of the LCS		Seq. identity

D-Amino Acid Oxidase, subunit A, domain 2 (3.30.9.10)

1an9A02 (length 193)	\|LCS\|/\|Key Seq.\|: [0.9, 1.0] 0 [0.8, 0.9) 0 [0.7, 0.8) 2006 Exe. Time: 18.1 (sec.)	d1q8ia1 (Res23-234) \|L\|/\|K\|: 0.79 LCS len.: 153		Z: 1.2 AR: 37 RMSD 3.4A SI: 3%
1an9A02 (length 193)		d1t0la_ (Res3-214) \|L\|/\|K\|: 0.79 LCS len. 152		Z: 0.6 AR: 49 RMSD: 3.8A SI: 6%

1c0pA02 (length 208)	\|LCS\|/\|Key Seq.\|: [0.9, 1.0] 0 [0.8, 0.9) 1 [0.7, 0.8) 552 Exe. Time: 19.6 (sec.)	d1c0pa1 (Res1037-1359) \|L\|/\|K\|: 0.80 LCS len.: 167		Z: 8.8 AR: 125 RMSD 2.6A SI: 94%
1c0pA02 (length 208)		d1q0ba_ (Res18-261) \|L\|/\|K\|: 0.76 LCS len. 158		Z: 1.4 AR: 63 RMSD: 10.2A SI: 5%

1el5A02 (length 258)	\|LCS\|/\|Key Seq.\|: [0.9, 1.0] 0 [0.8, 0.9) 0 [0.7, 0.8) 271 Exe. Time: 24.3 (sec.)	d1el5a1 \|L\|/\|K\|: 0.76 LCS len.: 196		Z: 13.4 AR: 162 RMSD 1.2A SI: 98%
1el5A02 (length 258)		d1ka1a_ (Res4-285) \|L\|/\|K\|: 0.75 LCS len. 193		Z: 1.4 AR: 38 RMSD: 4.3A SI: 13%

1pn0A02 (length 358)	\|LCS\|/\|Key Seq.\|: [0.9, 1.0] 0 [0.8, 0.9) 0 [0.7, 0.8) 54 Exe. Time: 10.9 (sec.)	d1pn0a1 \|L\|/\|K\|: 0.76 LCS len.: 273		Z: 31.7 AR: 271 RMSD 0.0A SI: 100%
1pn0A02 (length 358)		d1jmu.1 (Res247-639) \|L\|/\|K\|: 0.73 LCS len. 261	No significant similarities	Z: - AR: - RMSD: -A SI: -%

1ryiA02 (length 210)	\|LCS\|/\|Key Seq.\|: [0.9, 1.0] 0 [0.8, 0.9) 0 [0.7, 0.8) 850 Exe. Time: 19.2 (sec.)	d1gx3a_ (Res2-232) \|L\|/\|K\|: 0.77 LCS len.: 161		Z: 0.2 AR: 41 RMSD 6.9A SI: 5%
1ryiA02 (length 210)		d1pj5a2 (Res76-425) \|L\|/\|K\|: 0.77 LCS len. 161		Z: 7.5 AR: 135 RMSD: 3.8A SI: 20%

Trypsin Inhibitor V, subunit A (3.30.10.10)

1cq4A00 (length 33)	\|LCS\|/\|Key Seq.\|: [0.9, 1.0] 20 [0.8, 0.9) 4227 [0.7, 0.8) 54032 Exe. Time: 7.5 (sec.)	d1cq4.1 (Res23-61) \|L\|/\|K\|: 1.00 LCS len.: 33	(identical)	Z: - AR: 33 RMSD 0.0A SI: 100%
1cq4A00 (length 33)		d2snii_ (Res22-57) \|L\|/\|K\|: 0.97 LCS len. 32		Z: 6.7 AR: 36 RMSD: 0.5A SI: 100%

1csel00 (length 59)	\|LCS\|/\|Key Seq.\|: [0.9, 1.0] 1 [0.8, 0.9) 41 [0.7, 0.8) 14236 Exe. Time: 10.9 (sec.)	d1csei_ \|L\|/\|K\|: 1.00 LCS len.: 59	(identical)	Z: - AR: 59 RMSD 0.0A SI: 100%
1csel00 (length 59)		d2snii_ \|L\|/\|K\|: 0.88 LCS len. 52		Z: 11.1 AR: 62 RMSD: 1.7A SI: 35%

1egpA00 (length 35)	\|LCS\|/\|Key Seq.\|: [0.9, 1.0] 3 [0.8, 0.9) 1869 [0.7, 0.8) 31125 Exe. Time: 8.0 (sec.)	d1csei_ (Res10-47) \|L\|/\|K\|: 0.91 LCS len.: 32	No significant similarities	Z: - AR: - RMSD -A SI: -%
1egpA00 (length 35)		d1dwma_ (Res3-46) \|L\|/\|K\|: 0.91 LCS len. 32		Z: 2.9 AR: 35 RMSD: 3.3A SI: 29%

1hymA00 (length 40)	\|LCS\|/\|Key Seq.\|: [0.9, 1.0] 4 [0.8, 0.9) 7998 [0.7, 0.8) 33026 Exe. Time: 7.6 (sec.)	d1ugla_ (Res5-48) \|L\|/\|K\|: 0.93 LCS len.: 37		Z: 0.6 AR: 32 RMSD 3.0A SI: 6%
1hymA00 (length 40)		d1b4ba_ (Res89-132) \|L\|/\|K\|: 0.93 LCS len. 37	No significant similarities	Z: - AR: - RMSD: -A SI: -%

1to2l00 (length 59)	\|LCS\|/\|Key Seq.\|: [0.9, 1.0] 4 [0.8, 0.9) 581 [0.7, 0.8) 27567 Exe. Time: 10.9 (sec.)	d1to2i_ \|L\|/\|K\|: 1.00 LCS len.: 59	(identical)	Z: - AR: 59 RMSD 0.0A SI: 100%
1to2l00 (length 59)		d1ypci_ \|L\|/\|K\|: 0.95 LCS len. 56		Z: 14.4 AR: 63 RMSD: 0.5A SI: 92%

1vbwA00 (length 64)	\|LCS\|/\|Key Seq.\|: [0.9, 1.0] 1 [0.8, 0.9) 274 [0.7, 0.8) 28758 Exe. Time: 10.4 (sec.)	d1dwma_ \|L\|/\|K\|: 0.91 LCS len.: 58		Z: 12.8 AR: 68 RMSD 1.4A SI: 53%
1vbwA00 (length 64)		d1egl__ \|L\|/\|K\|: 0.88 LCS len. 56		Z: 8.0 AR: 62 RMSD: 1.9A SI: 31%

Endochitinase, domain 2 (3.30.20.10)

2baa002 (length 54)	\|LCS\|/\|Key Seq.\|: [0.9, 1.0] 0 [0.8, 0.9) 17 [0.7, 0.8) 9688 Exe. Time: 10.3 (sec.)	d1cnsa_ (Res88-146) \|L\|/\|K\|: 0.87 LCS len.: 47	Z: 13.7 AR: 58 RMSD 0.5A SI: 100%
2baa002 (length 54)		d1dxja_ (Res84-142) \|L\|/\|K\|: 0.85 LCS len. 46	Z: 10.3 AR: 54 RMSD: 1.0A SI: 69%